RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
VAMP4-202ENST00000367740 ZNF281Q9Y2X9 895 aa13.03□□□□□ -0.32
VAMP4-202ENST00000367740 OR2M5A3KFT3 312 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 H7C417 338 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 PGRMC2O15173 223 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 TGFAP01135 160 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 CCDC166P0CW27 439 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 APEHP13798 732 aaKnown RBP13.02□□□□□ -0.33
VAMP4-202ENST00000367740 EPB42P16452 691 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 HK1P19367 917 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 NT5EP21589 574 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 IRF8Q02556 426 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 EXOSC7Q15024 291 aaKnown RBP13.02□□□□□ -0.33
VAMP4-202ENST00000367740 TGFBIQ15582 683 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 TBCCQ15814 346 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 SGCBQ16585 318 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 GGNQ86UU5 652 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 GABRG1Q8N1C3 465 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 ADCY4Q8NFM4 1077 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 OR7G3Q8NG95 312 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 ANKRD49Q8WVL7 239 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 HSD17B8Q92506 261 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 TMBIM1Q969X1 311 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 SLC35A4Q96G79 324 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 HBEGFQ99075 208 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 SOX7Q9BT81 388 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 ZBTB26Q9HCK0 441 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 CBLN4Q9NTU7 201 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 XPR1Q9UBH6 696 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 CTNNAL1Q9UBT7 734 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.33
VAMP4-202ENST00000367740 CORO1CQ9ULV4 474 aaPredicted RBP13.02□□□□□ -0.33
VAMP4-202ENST00000367740 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 TO15178 435 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 LY6HO94772 140 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 IPO7O95373 1038 aaKnown RBP13.01□□□□□ -0.33
VAMP4-202ENST00000367740 FAM58BPP0C7Q3 252 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 PGAM1P18669 254 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 IL32P24001 234 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 PIK3R1P27986 724 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 AGTR1P30556 359 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 TTKP33981 857 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 SFRP5Q5T4F7 317 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 C6orf163Q5TEZ5 329 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 MED27Q6P2C8 311 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 FAM111BQ6SJ93 734 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 NKAPQ8N5F7 415 aaKnown RBP13.01□□□□□ -0.33
VAMP4-202ENST00000367740 OR2M3Q8NG83 312 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 KAT2AQ92830 837 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 C3orf49Q96BT1 292 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 HDHD5Q9BXW7 423 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 DSN1Q9H410 356 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 CNOT10Q9H9A5 744 aaKnown RBP13.01□□□□□ -0.33
VAMP4-202ENST00000367740 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 FBXO34Q9NWN3 711 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 CFL2Q9Y281 166 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 PLLPQ9Y342 182 aa13.01□□□□□ -0.33
VAMP4-202ENST00000367740 IGHV4-61A0A0C4DH41 118 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 LINC01387J3KSC0 135 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 ABCD4O14678 606 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 STK16O75716 305 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 CPMP14384 443 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 CREB1P16220 341 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 SERPINB1P30740 379 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 BSGP35613 385 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 SRP14P37108 136 aaKnown RBP13□□□□□ -0.33
VAMP4-202ENST00000367740 MGAT2Q10469 447 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 DDX39BQ13838 428 aaKnown RBP13□□□□□ -0.33
VAMP4-202ENST00000367740 P2RY6Q15077 328 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 PDCD2Q16342 344 aaPredicted RBP13□□□□□ -0.33
VAMP4-202ENST00000367740 PRICKLE4Q2TBC4 344 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 MFSD12Q6NUT3 480 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 TCAIMQ8N3R3 496 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 UBE2E3Q969T4 207 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 ADOQ96SZ5 270 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 ZNF696Q9H7X3 374 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 MAT2BQ9NZL9 334 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 BCAP29Q9UHQ4 241 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 ZNF639Q9UID6 485 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
VAMP4-202ENST00000367740 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 A0A0A6YYJ9 748 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 E7EQL1 145 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 SLCO1B7G3V0H7 640 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 TSPAN2O60636 221 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 REM1O75628 298 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 NTN1O95631 604 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 CBX7O95931 251 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 DRD5P21918 477 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 NR4A2P43354 598 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 PPICP45877 212 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 EIF1AXP47813 144 aaKnown RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 XKP51811 444 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms