RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CCDC163A0A0D9SF12 145 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 OR6C6A6NF89 314 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 SLC1A7O00341 560 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 CREBL2O60519 120 aaPredicted RBP14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 PTHP01270 115 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 FDXRP22570 491 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 KDELR2P33947 212 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 TBC1D20Q96BZ9 403 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 LRR1Q96L50 414 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 TEPSINQ96N21 525 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 ZNF395Q9H8N7 513 aaPredicted RBP14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 AIG1Q9NVV5 245 aa14.9□□□□□ -0.02
NUCKS1-201ENST00000367142 OR8U9P0C7N5 309 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 CD46P15529 392 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 BPIP17213 487 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 CHMP24386 653 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ELK4P28324 431 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 HTR3AP46098 478 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 RRAS2P62070 204 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 KDELC1Q6UW63 502 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF704Q6ZNC4 412 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 TRIM73Q86UV7 250 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF619Q8N2I2 560 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ENKD1Q9H0I2 346 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 FAM118AQ9NWS6 357 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 TBX10O75333 385 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 NDUFAF5Q5TEU4 345 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 C22orf42Q6IC83 251 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 CHRDQ9H2X0 955 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 VRTNQ9H8Y1 702 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 MEGF11A6BM72 1044 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 JRKO75564 520 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 IL32P24001 234 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 SOX3P41225 446 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 Q8N402 240 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 TANKQ92844 425 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 SPIN2AQ99865 258 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 SPIN2BQ9BPZ2 258 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 GDE1Q9NZC3 331 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 H7C2Y5 167 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 K7ERQ8 282 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 HTRA2O43464 458 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 FAM189A1O60320 539 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 TMEM236Q5W0B7 351 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 SLC2A12Q8TD20 617 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 TMEM19Q96HH6 336 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF705EA8MWA4 302 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 GABBR2O75899 941 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 RASAL1O95294 804 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF888P0CJ79 500 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 PLD6Q8N2A8 252 aaKnown RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 CDRT4Q8N9R6 151 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 OR1S1Q8NH92 325 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 FCRL3Q96P31 734 aaPredicted RBP14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 SLAMF7Q9NQ25 335 aa14.89□□□□□ -0.03
NUCKS1-201ENST00000367142 BLACEA4D250 179 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 EIF3FO00303 357 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 RAB3AP20336 220 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 GPRIN1Q7Z2K8 1008 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF317Q96PQ6 595 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 DPH2Q9BQC3 489 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 UNKLQ9H9P5 680 aaKnown RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CARD8Q9Y2G2 431 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 PPP1R3DO95685 299 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 SERPINA5P05154 406 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 MAP2K4P45985 399 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 MAP2K3P46734 347 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CSNK1A1P48729 337 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 PRKXP51817 358 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CLDN8P56748 225 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 GRB7Q14451 532 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 FAM182AQ5T1J6 154 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 OR52N2Q8NGI0 321 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CUTCQ9NTM9 273 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 SDHAF2Q9NX18 166 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 PSAT1Q9Y617 370 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 COL1A1P02452 1464 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 KIR2DS5A0A0G2JLQ3 304 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 A0A0G2JNG1 304 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 KIR2DS3K7RE56 304 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 ARHGEF15O94989 841 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 NDUFB2O95178 105 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 FGF3P11487 239 aaPredicted RBP14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CD53P19397 219 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 KIR2DS5Q14953 304 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.88□□□□□ -0.031e-6■■■□□ 15.1
NUCKS1-201ENST00000367142 TMEM25Q86YD3 366 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 NAT6Q93015 286 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 AMDHD1Q96NU7 426 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 AMY2AP04746 511 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 LCKP06239 509 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 HMGCLP35914 325 aa14.88□□□□□ -0.03
NUCKS1-201ENST00000367142 MC3RP41968 323 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms