RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKN-204ENST00000366896 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 TAS2R7Q9NYW3 318 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 ADAM29Q9UKF5 820 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 DIMT1Q9UNQ2 313 aaKnown RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 FAM240BA0A1B0GVZ2 78 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 WASHC1A8K0Z3 465 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 LYRM1O43325 122 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 OR10H3O60404 316 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 ARSBP15848 533 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 BSGP35613 385 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 HSD17B2P37059 387 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 MAPK12P53778 367 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 MANFP55145 182 aaKnown RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 ST8SIA6P61647 398 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 PPP3R1P63098 170 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 ZNF234Q14588 700 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 WSCD2Q2TBF2 565 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 FLYWCH1Q4VC44 716 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 USP30Q70CQ3 517 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 COMTD1Q86VU5 262 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 SMPDL3AQ92484 453 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 F2RL3Q96RI0 385 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 OR52A5Q9H2C5 316 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 WASH6PQ9NQA3 447 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 SIRT3Q9NTG7 399 aaPredicted RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 ZSCAN32Q9NX65 697 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 NLKQ9UBE8 527 aa13.83□□□□□ -0.2
PRKN-204ENST00000366896 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
PRKN-204ENST00000366896 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 H3BN98 237 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 K7EQS6 105 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 HMGN4O00479 90 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 POP7O75817 140 aaKnown RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 PRNPP04156 253 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TP53P04637 393 aaPredicted RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 TNFRSF4P43489 277 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 FNDC3BQ53EP0 1204 aaKnown RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 C6orf120Q7Z4R8 191 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 ABI3BPQ7Z7G0 1075 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 PDZD3Q86UT5 571 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 C9orf62Q8N4C0 152 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 OR4M2Q8NGB6 313 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 DNAJA4Q8WW22 397 aaPredicted RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 UCN3Q969E3 161 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TMEM203Q969S6 136 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 HYLS1Q96M11 299 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 C12orf10Q9HB07 376 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 ISYNA1Q9NPH2 558 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 THAP10Q9P2Z0 257 aaPredicted RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 F5P12259 2224 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 SHISA7A6NL88 538 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 CDK2AP1O14519 115 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 GLULP15104 373 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 RAB25P57735 213 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TRA2BP62995 288 aaKnown RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 ABATP80404 500 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 EFNB1P98172 346 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TMEM196Q5HYL7 178 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 ZBTB37Q5TC79 503 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 METAP1DQ6UB28 335 aaPredicted RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 OLIG3Q7RTU3 272 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 DCUN1D3Q8IWE4 304 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 ANKRD53Q8N9V6 530 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TMEM145Q8NBT3 493 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 FGF11Q92914 225 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 NUS1Q96E22 293 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 DCLRE1CQ96SD1 692 aaKnown RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 AIF1LQ9BQI0 150 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 PCBD2Q9H0N5 130 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 SERHL2Q9H4I8 314 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 TESQ9UGI8 421 aaKnown RBP13.82□□□□□ -0.2
PRKN-204ENST00000366896 NUP50Q9UKX7 468 aa13.82□□□□□ -0.2
PRKN-204ENST00000366896 IRGMA1A4Y4 181 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 OR5K3A6NET4 321 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 STK25O00506 426 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 ORC5O43913 435 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 EVI2BP34910 448 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 GPR1P46091 355 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 PLK5Q496M5 336 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 CNIH2Q6PI25 160 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 ZNF782Q6ZMW2 699 aaPredicted RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 SLC51BQ86UW2 128 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 C17orf64Q86WR6 236 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TBC1D19Q8N5T2 526 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TCEANCQ8N8B7 351 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 OR52P1PQ8NH57 321 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TMEM163Q8TC26 289 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SLC7A13Q8TCU3 470 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 MVB12BQ9H7P6 319 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 B3GAT2Q9NPZ5 323 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 CUEDC1Q9NWM3 386 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms