RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 SIRPDQ9H106 197 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 EXOSC3Q9NQT5 275 aaKnown RBP2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 ELOVL2Q9NXB9 296 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 NYAP2Q9P242 653 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 GHRLQ9UBU3 117 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 CLIP2Q9UDT6 1046 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 FLVCR1Q9Y5Y0 555 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 TEX264Q9Y6I9 313 aa2.47□□□□□ -2.01
RNU4-1-201ENST00000363925 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 IGKV6D-21A0A0A0MT36 114 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ZFP92A6NM28 416 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ANP32DO95626 131 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 SLC4A1P02730 911 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 GSTT2P0CG29 244 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 GSTT2BP0CG30 244 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 TSPAN8P19075 237 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 PSMB1P20618 241 aaKnown RBP2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 OR1D4P47884 311 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ALDH3B2P48448 385 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 NUMBP49757 651 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 SLC26A2P50443 739 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 DIO3P55073 304 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 HERVK_113P63132 956 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ERVK-8P63133 956 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 AP1B1Q10567 949 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 CAMK4Q16566 473 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 KYAT1Q16773 422 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 C2orf83Q53S99 150 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 C9orf129Q5T035 196 aaKnown RBP2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 LGSNQ5TDP6 509 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 IL23RQ5VWK5 629 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ZNF544Q6NX49 715 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ADGRD2Q7Z7M1 963 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 GPR65Q8IYL9 337 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ZNF397Q8NF99 534 aaPredicted RBP2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 OR13F1Q8NGS4 319 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ART4Q93070 314 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 C11orf24Q96F05 449 aaPredicted RBP2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 NSMCE2Q96MF7 247 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 RUFY1Q96T51 708 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 NDUFAF3Q9BU61 184 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 ERVK-6Q9BXR3 956 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 PTGES2Q9H7Z7 377 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 CYP39A1Q9NYL5 469 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 FETUBQ9UGM5 382 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 PRO0461Q9UI25 63 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 PLA2G4CQ9UP65 541 aa2.46□□□□□ -2.02
RNU4-1-201ENST00000363925 GRIN2DO15399 1336 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 A0A1W2PNU3 283 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 TTC26A0AVF1 554 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 TRIM64A6NGJ6 449 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 EPOPA6NHQ4 379 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 TRIM64BA6NI03 449 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 SLC17A2O00624 439 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 PDXKO00764 312 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 STAM2O75886 525 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 STK17BO94768 372 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 SLC35G4P0C7Q5 338 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 P0C879 139 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 RALAP11233 206 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 PRDX6P30041 224 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 ATP6V1E1P36543 226 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 HTR5AP47898 357 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 STK19P49842 368 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 UBE2V2Q15819 145 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 DCAF4L1Q3SXM0 396 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 HERC4Q5GLZ8 1057 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 OR6B2Q6IFH4 312 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 SCYL2Q6P3W7 929 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 TMEM26Q6ZUK4 368 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 MIER3Q7Z3K6 550 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 FAM9BQ8IZU0 186 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 ZNF713Q8N859 430 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 ZNF564Q8TBZ8 553 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 SLC25A38Q96DW6 304 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 NUS1Q96E22 293 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 VPS39Q96JC1 886 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 ELMO2Q96JJ3 720 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 FTHL17Q9BXU8 183 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 XPO4Q9C0E2 1151 aaKnown RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 OPN3Q9H1Y3 402 aaPredicted RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 TMEM231Q9H6L2 316 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 SYTL2Q9HCH5 934 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 RBM28Q9NW13 759 aaKnown RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 KCNN3Q9UGI6 736 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 APOBEC3BQ9UH17 382 aaKnown RBP2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 NUDCQ9Y266 331 aa2.45□□□□□ -2.02
RNU4-1-201ENST00000363925 CFAP73A6NFT4 308 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 E9PLD3 99 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 CCER2I3L3R5 266 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 PDLIM1O00151 329 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 NUDT21O43809 227 aaKnown RBP2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 CPN1P15169 458 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 IGHV1-2P23083 117 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 HLCSP50747 726 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 RPS6P62753 249 aaKnown RBP2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 PLOD1Q02809 727 aaPredicted RBP2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 WASHC5Q12768 1159 aa2.44□□□□□ -2.02
RNU4-1-201ENST00000363925 PKN2Q16513 984 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms