RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 HERV-K104P63124 156 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 CTAG1AP78358 180 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 ELF3P78545 371 aaPredicted RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 XIAPP98170 497 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 GPR17Q13304 367 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 MSLNQ13421 630 aaPredicted RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 SELPLGQ14242 412 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 PARP6Q2NL67 630 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 GTDC1Q4AE62 458 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 GPAT3Q53EU6 434 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 SLC25A53Q5H9E4 307 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 CEP170Q5SW79 1584 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FAM72AQ5TYM5 149 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 IL23RQ5VWK5 629 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 MROH7Q68CQ1 1323 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 LRRC66Q68CR7 880 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FAM72DQ6L9T8 149 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 UGT3A1Q6NUS8 523 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FAM159AQ6UWV7 190 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FRA10AC1Q70Z53 315 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FAM72BQ86X60 149 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 IFT20Q8IY31 132 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 CNBD1Q8NA66 436 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 CCDC197Q8NCU1 140 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 TTC21AQ8NDW8 1320 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 CCDC12Q8WUD4 166 aaPredicted RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 UBTD2Q8WUN7 234 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 ZNF707Q96C28 371 aaPredicted RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 C12orf66Q96MD2 445 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 PGLYRP2Q96PD5 576 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 XPO6Q96QU8 1125 aaKnown RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 NPY6RQ99463 290 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 TMEM43Q9BTV4 400 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 API5Q9BZZ5 524 aaKnown RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 C10orf88Q9H8K7 445 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 APMAPQ9HDC9 416 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 RAB18Q9NP72 206 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 FGF21Q9NSA1 209 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 INTS9Q9NV88 658 aaKnown RBP4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 IFT52Q9Y366 437 aa4.08□□□□□ -1.76
RNU1-87P-201ENST00000363727 ADGBQ8N7X0 1667 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 ABCA9Q8IUA7 1624 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 RNF17Q9BXT8 1623 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 ADGRL2O95490 1459 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 OVOS2A0A0G2JMS6 1433 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 OVOS2A0A0J9YW53 1432 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 OVOS2Q6IE36 1432 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 POGZQ7Z3K3 1410 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 RIMS2Q9UQ26 1411 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PLEKHG1Q9ULL1 1385 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PFASO15067 1338 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 GRIN2DO15399 1336 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 MBLAC1A4D2B0 266 aaPredicted RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CCT8L1PA6NM43 557 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 SYCE1LA8MT33 242 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 BLOC1S5-TXNDC5H3BN57 136 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 EEF2KO00418 725 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 ARPC2O15144 300 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 KMOO15229 486 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 RNF13O43567 381 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 EXTL3O43909 919 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 WBP4O75554 376 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 LCA5LO95447 670 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 POP4O95707 220 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CPNE6O95741 557 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 LGI1O95970 557 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 S100A6P06703 90 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 FHP07954 510 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PNMTP11086 282 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 SLC2A3P11169 496 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 TPSB2P20231 275 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PRKACBP22694 351 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 HTR2AP28223 471 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 NMT1P30419 496 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CHRNB4P30926 498 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 TMED10P49755 219 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 LBX1P52954 281 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 RASGEF1BQ0VAM2 473 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 ILF2Q12905 390 aaKnown RBP4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 IL18Q14116 193 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 HERC3Q15034 1050 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 P2RY6Q15077 328 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 P2RY14Q15391 338 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 TPSAB1Q15661 275 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 TSC22D1Q15714 1073 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CAMK4Q16566 473 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 KIAA1644Q3SXP7 199 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 HIKESHIQ53FT3 197 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 FFAR4Q5NUL3 377 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CCNJQ5T5M9 372 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PRAMEF5Q5TYX0 476 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 AGBL2Q5U5Z8 902 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 PRAMEF6Q5VXH4 476 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 NKAIN2Q5VXU1 208 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 TTC23LQ6PF05 361 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 CBLN3Q6UW01 205 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 BHLHA9Q7RTU4 235 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 ZNF329Q86UD4 541 aa4.07□□□□□ -1.76
RNU1-87P-201ENST00000363727 FAM131BQ86XD5 332 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms