RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CYP2F1P24903 491 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 ADSSP30520 456 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 P2RY2P41231 377 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 LEPRP48357 1165 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 TUFMP49411 452 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 LCP2Q13094 533 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRA2AQ13595 282 aaKnown RBP eCLIP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 CDH18Q13634 790 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 ITGA9Q13797 1035 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 PDE7AQ13946 482 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 MTF1Q14872 753 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 PDGFRLQ15198 375 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 DUSP5Q16690 384 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 ARMCX5Q6P1M9 558 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 ITIH5Q86UX2 942 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 EFCAB13Q8IY85 973 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 TSTD1Q8NFU3 115 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 OR10G8Q8NGN5 311 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 EEF2KMTQ96G04 330 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 CNOT6LQ96LI5 555 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 TDRD1Q9BXT4 1180 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCSER1Q9C0I3 900 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 IL19Q9UHD0 177 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 POMT2Q9UKY4 750 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 SATB2Q9UPW6 733 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 NEUROG3Q9Y4Z2 214 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 PRSS44E7EML9 344 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 RTCAO00442 366 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF195O14628 629 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 OGTO15294 1046 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 CLN5O75503 358 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 NOL4O94818 638 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ABHD2P08910 425 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ODC1P11926 461 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 GNB3P16520 340 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ANOS1P23352 680 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 SOX3P41225 446 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 DHPSP49366 369 aaPredicted RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ACOT2P49753 483 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF131P52739 623 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 CSNK2BP67870 215 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 HNRNPA0Q13151 305 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ORC2Q13416 577 aaPredicted RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 HNRNPDQ14103 355 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 LRRC37A5PQ49AS3 106 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC27A4Q6P1M0 643 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 MACC1Q6ZN28 852 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 C17orf107Q6ZR85 190 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRMT11Q7Z4G4 463 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 MARCH9Q86YJ5 346 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF619Q8N2I2 560 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 PDCL2Q8N4E4 241 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 DEFB119Q8N690 84 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ALLCQ8N6M5 410 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 NEK11Q8NG66 645 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 SMAP2Q8WU79 429 aaPredicted RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNRF4Q8WWF5 429 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 AZIN2Q96A70 460 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ULK4Q96C45 1275 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF501Q96CX3 271 aaPredicted RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 C2orf48Q96LS8 159 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 SPATA13Q96N96 652 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 FUCA2Q9BTY2 467 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZDHHC6Q9H6R6 413 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ANO10Q9NW15 660 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 DUS2Q9NX74 493 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 PSORS1C1Q9UIG5 152 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRMT6Q9UJA5 497 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 MMP17Q9ULZ9 603 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 WDR37Q9Y2I8 494 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 STYXL1Q9Y6J8 313 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 MTCL1Q9Y4B5 1905 aaKnown RBP4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 APC2O95996 2303 aa4.85□□□□□ -1.63
RNU4-39P-201ENST00000362455 ASXL3Q9C0F0 2248 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 WDR81Q562E7 1941 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 MIA3Q5JRA6 1907 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 A0A087WW49 117 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 A0A087WZ39 114 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 KPNA7A9QM74 516 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 GAS8O95995 478 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 NUDT17P0C025 328 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 UGT1A6P19224 532 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 AADACP22760 399 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 LMO2P25791 158 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 GJB2P29033 226 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 CDKN1AP38936 164 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC1A3P43003 542 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 CASP9P55211 416 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 XGP55808 180 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 GTF2BQ00403 316 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 KARSQ15046 597 aaKnown RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 CNSTQ6PJW8 725 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 PTAR1Q7Z6K3 402 aaPredicted RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 LSMEM2Q8N112 164 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 RAB42Q8N4Z0 105 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TEX26Q8N6G2 289 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms