RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GPR174Q9BXC1 333 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 PRODH2Q9UF12 536 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 DNMT3AQ9Y6K1 912 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-201ENST00000360565 FAM183AA6NL82 134 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 SOX1O00570 391 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-201ENST00000360565 AK1P00568 194 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 GKN3PP0CG01 181 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 KDM4DQ6B0I6 523 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 CYHR1Q6ZMK1 362 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 ARMCX6Q7L4S7 300 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 RBM12BQ8IXT5 1001 aaKnown RBP15.42■□□□□ 0.06
SCAF1-201ENST00000360565 TIGD4Q8IY51 512 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 AVL9Q8NBF6 648 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 G6PC3Q9BUM1 346 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 ZBP1Q9H171 429 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF69Q9UC07 566 aa15.42■□□□□ 0.06
SCAF1-201ENST00000360565 TCRBV5S2A0A599 114 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 ACPPP15309 386 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 TNFSF8P32971 234 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 IRF4Q15306 451 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 ZC3H14Q6PJT7 736 aaKnown RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 CHTF18Q8WVB6 975 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 INSM2Q96T92 566 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 QRSL1Q9H0R6 528 aaKnown RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 SEC61A2Q9H9S3 476 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 IFT46Q9NQC8 304 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 ACSS1Q9NUB1 689 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF225Q9UK10 706 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 FAM155AB1AL88 458 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 TLX3O43711 291 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 JUNBP17275 347 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 GAS6Q14393 721 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 CCNJQ5T5M9 372 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 FCRLBQ6BAA4 426 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 SDR16C5Q8N3Y7 309 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 GFYI3L273 518 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 FZD6O60353 706 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 PPM1BO75688 479 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 SOX30O94993 753 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 GABARAPO95166 117 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 EIF1AXP47813 144 aaKnown RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 BTBD16Q32M84 506 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 TMEM53Q6P2H8 277 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 VRK2Q86Y07 508 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 GDPD1Q8N9F7 314 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 OR5K2Q8NHB8 316 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 ACOT11Q8WXI4 607 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-201ENST00000360565 SGCDQ92629 289 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 OCEL1Q9H607 264 aa15.41■□□□□ 0.06
SCAF1-201ENST00000360565 P2RY2P41231 377 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CTU2Q2VPK5 515 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 ADPRMQ3LIE5 342 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 OR2G6Q5TZ20 316 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF852Q6ZMS4 543 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 PARP16Q8N5Y8 322 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CHPT1Q8WUD6 406 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 RIT1Q92963 219 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SAMD11Q96NU1 681 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 LYSMD1Q96S90 227 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SLC2A4RGQ9NR83 387 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 PADI2Q9Y2J8 665 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 GFRA2O00451 464 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 RGS9O75916 674 aaPredicted RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 JUNDP17535 347 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 GPR143P51810 404 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 RPL6Q02878 288 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SNTB2Q13425 540 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SEC23BQ15437 767 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 HENMT1Q5T8I9 393 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 PIP5KL1Q5T9C9 394 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SLC25A24Q6NUK1 477 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 ARHGAP11AQ6P4F7 1023 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 MS4A15Q8N5U1 240 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CDRT4Q8N9R6 151 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 WDR20Q8TBZ3 569 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 SUN5Q8TC36 379 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 BCL2L14Q9BZR8 327 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 NANSQ9NR45 359 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 GDE1Q9NZC3 331 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 USP36Q9P275 1121 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 APOBEC3BQ9UH17 382 aaKnown RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 ARHGAP33O14559 1287 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 ANKRD28O15084 1053 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 LDB3O75112 727 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 MAPK3P27361 379 aaPredicted RBP15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CHRNEQ04844 493 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CNIH2Q6PI25 160 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 GKN2Q86XP6 184 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 NEK7Q8TDX7 302 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 CENPOQ9BU64 300 aa15.4■□□□□ 0.06
SCAF1-201ENST00000360565 PRKYO43930 277 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 LDOC1O95751 146 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SLC6A12P48065 614 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 TRAM1Q15629 374 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 RAB30Q15771 203 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 FAM78AQ5JUQ0 283 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 CD300LGQ6UXG3 332 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms