RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 HLA-DQA1Q5Y7H0 255 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 USP30Q70CQ3 517 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NLRP8Q86W28 1048 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 C17orf64Q86WR6 236 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 ACVR1CQ8NER5 493 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 MOCOSQ96EN8 888 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 EVA1AQ9H8M9 152 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 A0A1B0GTQ1 180 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LOC285095A0A1B0GVY8 99 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 RGS9O75916 674 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DCNP07585 359 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SLC2A2P11168 524 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 C5AR1P21730 350 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SPIBQ01892 262 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NFATC2Q13469 925 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 KEAP1Q14145 624 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 HABP2Q14520 560 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CPTPQ5TA50 214 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 GALNT5Q7Z7M9 940 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CHST14Q8NCH0 376 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 ZFAND1Q8TCF1 268 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 STK35Q8TDR2 534 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CMTM7Q96FZ5 175 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LRIG1Q96JA1 1093 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 ZNF514Q96K75 400 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SLC30A3Q99726 388 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 OSER1Q9NX31 292 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 UPB1Q9UBR1 384 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DHRS7Q9Y394 339 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PCYT1BQ9Y5K3 369 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SLC31A2O15432 143 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SIX6O95475 246 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SMIM6P0DI80 62 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 IFNGR2P38484 337 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CTSOP43234 321 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 MRPL19P49406 292 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CLCNKAP51800 687 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SPCS3P61009 180 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CPSF6Q16630 551 aaKnown RBP eCLIP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DUOXA1Q1HG43 343 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 TMEM44Q2T9K0 475 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PDZD11Q5EBL8 140 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PRAMEF14Q5SWL7 426 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 MEDAGQ5VYS4 303 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 AFMIDQ63HM1 303 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LRRTM4Q86VH4 590 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LYSMD2Q8IV50 215 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 OR13J1Q8NGT2 312 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LMLNQ96KR4 655 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DPYSL5Q9BPU6 564 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CNPPD1Q9BV87 410 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 TMED9Q9BVK6 235 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CD244Q9BZW8 370 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NKX6-2Q9C056 277 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 MARCH4Q9P2E8 410 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 GALPQ9UBC7 116 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 FARSAQ9Y285 508 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 LYVE1Q9Y5Y7 322 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PHOX2AO14813 284 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 RP2O75695 350 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DIRAS3O95661 229 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SPNP16150 400 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 DPP6P42658 865 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 MEP1AQ16819 746 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 KIAA1614Q5VZ46 1190 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NAGSQ8N159 534 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 OR6Q1Q8NGQ2 317 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 FUBP1Q96AE4 644 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 TOE1Q96GM8 510 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 ASB16Q96NS5 453 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 NPAS1Q99742 590 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 RNF121Q9H920 327 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 KCTD3Q9Y597 815 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 ACOD1A6NK06 481 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 TNFRSF11BO00300 401 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 TSPAN6O43657 245 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 JUNP05412 331 aaKnown RBP9.41□□□□□ -0.9
SIN3A-201ENST00000360439 ALDOCP09972 364 aaKnown RBP9.41□□□□□ -0.9
SIN3A-201ENST00000360439 ARRB2P32121 409 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 ADH7P40394 386 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 NAE1Q13564 534 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 CAPN13Q6MZZ7 669 aaPredicted RBP9.41□□□□□ -0.9
SIN3A-201ENST00000360439 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 FAM129CQ86XR2 697 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 OR4A15Q8NGL6 344 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 SLC22A18Q96BI1 424 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 QRFPRQ96P65 431 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 TTLL2Q9BWV7 592 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 ARL6Q9H0F7 186 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 FAM120CQ9NX05 1096 aaKnown RBP9.41□□□□□ -0.9
SIN3A-201ENST00000360439 STSP08842 583 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 PPP2R1BP30154 601 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 RBM34P42696 430 aaKnown RBP9.41□□□□□ -0.9
SIN3A-201ENST00000360439 KCNJ3P48549 501 aa9.41□□□□□ -0.9
SIN3A-201ENST00000360439 GANABQ14697 944 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms