RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NLRC3Q7RTR2 1065 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TEX26Q8N6G2 289 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 OR52P1PQ8NH57 321 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SCGB1C1Q8TD33 95 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RGMAQ96B86 450 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TSGA13Q96PP4 275 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 INPP5KQ9BT40 448 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PGGT1BP53609 377 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CLEC20AQ6ZU45 233 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TPRA1Q86W33 373 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 OR9Q2Q8NGE9 314 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 DYNC2LI1Q8TCX1 351 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 C3orf30Q96M34 536 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NPY6RQ99463 290 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RDH14Q9HBH5 336 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 WDR45Q9Y484 360 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC25A12O75746 678 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 AGR2O95994 175 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.77□□□□□ -1.487e-7■■■□□ 16.6
VPS13B-203ENST00000358544 CPOQ8IVL8 374 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 COX18Q8N8Q8 333 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 OR5T1Q8NG75 326 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 KCTD13Q8WZ19 329 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 LPPQ93052 612 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 RERGQ96A58 199 aaPredicted RBP5.77□□□□□ -1.48
VPS13B-203ENST00000358544 CD180Q99467 661 aa5.77□□□□□ -1.48
VPS13B-203ENST00000358544 LMO7Q8WWI1 1683 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 YJEFN3A6XGL0 299 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 DPP6P42658 865 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 DAPP51397 102 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ARSDP51689 593 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MRPS10P82664 201 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ODF4Q2M2E3 257 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 BTLAQ7Z6A9 289 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 BTBD2Q9BX70 525 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GSTO2Q9H4Y5 243 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 INPP5EQ9NRR6 644 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MAN2C1Q9NTJ4 1040 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GPR45Q9Y5Y3 372 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 LATS1O95835 1130 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 S1PR4O95977 384 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 TAS2R50P59544 299 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CREB5Q02930 508 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF763Q0D2J5 394 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF705AQ6ZN79 300 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PDZD3Q86UT5 571 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 KCT2Q8NC54 265 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR4K5Q8NGD3 323 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ARHGAP39Q9C0H5 1083 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 THSD1Q9NS62 852 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 NLE1Q9NVX2 485 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 YLPM1P49750 1951 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR6C75A6NL08 312 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 UBL3O95164 117 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GAAP10253 952 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GCGRP47871 477 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 KIAA1024LP59773 190 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 NXNL2Q5VZ03 156 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 THOC6Q86W42 341 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR1M1Q8NGA1 313 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR5D16Q8NGK9 328 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 LINC01599Q8WXQ3 324 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MRGPRX2Q96LB1 330 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GABARAPL1Q9H0R8 117 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PRRC2CQ9Y520 2896 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF821O75541 412 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MAS1P04201 325 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OSMP13725 252 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 AMY2BP19961 511 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 RAB6AP20340 208 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PTAFRP25105 342 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 KDELR2P33947 212 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PBX2P40425 430 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SMAD3P84022 425 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 LRRC32Q14392 662 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PUM1Q14671 1186 aaKnown RBP eCLIP5.77□□□□□ -1.494e-6■□□□□ 8.5
VPS13B-203ENST00000358544 RGNQ15493 299 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ALG11Q2TAA5 492 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MS4A13Q5J8X5 152 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 LINGO4Q6UY18 593 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GLB1L2Q8IW92 636 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR6S1Q8NH40 331 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 DCUN1D4Q92564 292 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CDKN2AIPNLQ96HQ2 116 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GORASP2Q9H8Y8 452 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FBXW2Q9UKT8 454 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 USP22Q9UPT9 525 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF878C9JN71 531 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 AIPO00170 330 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SAP18O00422 153 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 VIPR1P32241 457 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CATSPEREQ5SY80 951 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PELI3Q8N2H9 469 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ISL2Q96A47 359 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 KCTD12Q96CX2 325 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 C1orf74Q96LT6 269 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF582Q96NG8 517 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ALG8Q9BVK2 526 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms