RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MECP2P51608 486 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RAB11BQ15907 218 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RNASE10Q5GAN6 216 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZC3H14Q6PJT7 736 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SPATC1Q76KD6 591 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF765Q7L2R6 523 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 LNX2Q8N448 690 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PGAM5Q96HS1 289 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SMIM14Q96QK8 99 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF350Q9GZX5 532 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 KCNN3Q9UGI6 736 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ENPP5Q9UJA9 477 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 EMCNQ9ULC0 261 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ANTXRLA6NF34 631 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 H7C2Y5 167 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 VNN2O95498 520 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 JMJD7P0C870 316 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PIGFQ07326 219 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF789Q5FWF6 425 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PAQR9Q6ZVX9 377 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 GPR149Q86SP6 731 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NRMQ8IXM6 262 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 Q8N9G6 341 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 BORCS8Q96FH0 119 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PRRC1Q96M27 445 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 LPAR4Q99677 370 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 LHPPQ9H008 270 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RARRES3Q9UL19 164 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 GJE1A6NN92 205 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR2T1O43869 369 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 HOXB9P17482 250 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CDKN2CP42773 168 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 PM20D2Q8IYS1 436 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SYT14Q8NB59 555 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CHST14Q8NCH0 376 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR5M3Q8NGP4 307 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR5J2Q8NH18 312 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR6C2Q9NZP2 312 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 A6NIZ1 184 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 FBP2O00757 339 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SCO2O43819 266 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 DIRAS3O95661 229 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 DRD1P21728 446 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CRABP1P29762 137 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CD97P48960 835 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 RAP1BP61224 184 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 RAP1AP62834 184 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 RPS26P62854 115 aaKnown RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 NCCRP1Q6ZVX7 275 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR5T2Q8NGG2 359 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ARRDC2Q8TBH0 407 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 DTD2Q96FN9 168 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 KCNK12Q9HB15 430 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 INTS6Q9UL03 887 aaKnown RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 KIR2DS5A0A0G2JLQ3 304 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 A0A0G2JNG1 304 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 KIR2DS3K7RE56 304 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SEMA4FO95754 770 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 GPR4P46093 362 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 APOFQ13790 326 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 KIR2DS5Q14953 304 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 UGT8Q16880 541 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CBLL1Q75N03 491 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 OR52E2Q8NGJ4 325 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 TIMM29Q9BSF4 260 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 CLMPQ9H6B4 373 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ACSS1Q9NUB1 689 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ATG12O94817 140 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 LHCGRP22888 699 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ADH6P28332 368 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 PITPNBP48739 271 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 BMXP51813 675 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 DEFB103AP81534 67 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 HHEXQ03014 270 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ACY1Q03154 408 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF704Q6ZNC4 412 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 VWA5B2Q8N398 1253 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 GPR26Q8NDV2 337 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 MDGA1Q8NFP4 955 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 VRK1Q99986 396 aaPredicted RBP11.12□□□□□ -0.63
COL9A1-202ENST00000357250 VAPAQ9P0L0 249 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SLC35A3Q9Y2D2 325 aa11.12□□□□□ -0.63
COL9A1-202ENST00000357250 SLC6A5Q9Y345 797 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms