RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 GINS1Q14691 196 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 NDUFAF5Q5TEU4 345 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 AGTRAPQ6RW13 159 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 ZNF695Q8IW36 515 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 PLD6Q8N2A8 252 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 CERS5Q8N5B7 392 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 KCNJ16Q9NPI9 418 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 AGPAT4Q9NRZ5 378 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 PHYHO14832 338 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 CX3CR1P49238 355 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 PEA15Q15121 130 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 UGT3A2Q3SY77 523 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 MRPL41Q8IXM3 137 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 SYT14Q8NB59 555 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 FUBP3Q96I24 572 aaKnown RBP eCLIP10.95□□□□□ -0.665e-8■■□□□ 11.6
SPTBN1-202ENST00000356805 LMF1Q96S06 567 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 CNOT2Q9NZN8 540 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 KNG1P01042 644 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 ASGR2P07307 311 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 RHOP08100 348 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 GGT1P19440 569 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 CD34P28906 385 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 PTH2RP49190 550 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 KCNQ1P51787 676 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 EVX2Q03828 476 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 TMEM115Q12893 351 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 RAB11BQ15907 218 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 ELP2Q6IA86 826 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 ASF1BQ9NVP2 202 aa10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 TEX10Q9NXF1 929 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 INTS6Q9UL03 887 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-202ENST00000356805 F5H5P2 479 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 ZNF30P17039 623 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RCAN2Q14206 197 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 SLC10A6Q3KNW5 377 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TXNDC5Q8NBS9 432 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 OR52E2Q8NGJ4 325 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 FRS2Q8WU20 508 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 SIAEQ9HAT2 523 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 DLG5Q8TDM6 1919 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 DUX1O43812 170 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RBMS1P29558 406 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 VEGFCP49767 419 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 IDH3GP51553 393 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RPS15P62841 145 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 DYRK1AQ13627 763 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 GPR19Q15760 415 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 FBXL22Q6P050 247 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TMPRSS7Q7RTY8 843 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 KLBQ86Z14 1044 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 ST6GALNAC5Q9BVH7 336 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 KLHL21Q9UJP4 597 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 HS3ST4Q9Y661 456 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 AQP2P41181 271 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 SERINC3Q13530 473 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 LACC1Q8IV20 430 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 OR5H6Q8NGV6 325 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 FAM46AQ96IP4 442 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TXNDC15Q96J42 360 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 SACM1LQ9NTJ5 587 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 EFCAB7A8K855 629 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 YY2O15391 372 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 KRTCAP2Q8N6L1 136 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 KCTD12Q96CX2 325 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 REEP4Q9H6H4 257 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 LOC285095A0A1B0GVY8 99 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 ALDOAP04075 364 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 CRYZQ08257 329 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TBCEQ15813 527 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RETREG3Q86VR2 466 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 OR51D1Q8NGF3 324 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.94□□□□□ -0.669e-7■■■□□ 17
SPTBN1-202ENST00000356805 AIG1Q9NVV5 245 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 YIPF1Q9Y548 306 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 ITGAMP11215 1152 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 GPR143P51810 404 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RPP30P78346 268 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 GALNT2Q10471 571 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 OR14L1PQ8NHC6 308 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TSACCQ96A04 125 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 KLHL13Q9P2N7 655 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 CACNG2Q9Y698 323 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 AQP9O43315 295 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 FMO6PO60774 539 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 IL1AP01583 271 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 TMEM225BP0DP42 221 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 HK3P52790 923 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 RNF4P78317 190 aa10.94□□□□□ -0.66
SPTBN1-202ENST00000356805 STEAP4Q687X5 459 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms