RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GDPGP1Q6ZNW5 385 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GALNT10Q86SR1 603 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TMEM150AQ86TG1 271 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TSPYL5Q86VY4 417 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 SGPP2Q8IWX5 399 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ACVR1CQ8NER5 493 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CSNK2A3Q8NEV1 391 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SCAMP4Q969E2 229 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SLC12A9Q9BXP2 914 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR2S2Q9NQN1 319 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 LRFN1Q9P244 771 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 NKX1-2Q9UD57 310 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 BTNL2Q9UIR0 455 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 UBR1Q8IWV7 1749 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 A0A0A6YYH2 397 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FEZF1A0PJY2 475 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 A6NJ64 397 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MEN1O00255 615 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR2T1O43869 369 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 HTR3BO95264 441 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MAOAP21397 527 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GGT5P36269 586 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MC3RP41968 323 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MAP2K4P45985 399 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GATMP50440 423 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CTXN1P60606 82 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 PPP1R8Q12972 351 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 MEF2DQ14814 521 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FAM69AQ5T7M9 428 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MTFR2Q6P444 385 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 PRSS48Q7RTY5 328 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SCML4Q8N228 414 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SYNPOQ8N3V7 929 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CREB3L4Q8TEY5 395 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 THAP3Q8WTV1 239 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 DDX1Q92499 740 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 PEX11GQ96HA9 241 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 AMDHD1Q96NU7 426 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CENPOQ9BU64 300 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 BEX2Q9BXY8 128 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ABCG5Q9H222 651 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF696Q9H7X3 374 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 BEX1Q9HBH7 125 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MAN2C1Q9NTJ4 1040 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ANKRD26Q9UPS8 1709 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 E7ESA3 106 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PRAMEF26H0Y7S4 382 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SSX4O60224 188 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 LILRB5O75023 590 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SLC34A2O95436 690 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SNAP29O95721 258 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 IFNA17P01571 189 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TP53P04637 393 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 HSD17B1P14061 328 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GPR4P46093 362 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 STK19P49842 368 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 PPP5CP53041 499 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 EPHA4P54764 986 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PCBD1P61457 104 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TRA2BP62995 288 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 SCGB2A2Q13296 93 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CLVS2Q5SYC1 327 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CBARPQ8N350 705 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 ADAMTS19Q8TE59 1207 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PXYLP1Q8TE99 480 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 JPH3Q8WXH2 748 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 IGSF8Q969P0 613 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TMEM19Q96HH6 336 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SSX3Q99909 188 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 DUSP23Q9BVJ7 150 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 BCAS3Q9H6U6 928 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ZBTB20Q9HC78 741 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 ZDHHC7Q9NXF8 308 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PIAS3Q9Y6X2 628 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 A0A087WUU8 490 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 KIAA0355O15063 1070 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PTTG1O95997 202 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CSF2P04141 144 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 FCER2P06734 321 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TGFBR3Q03167 851 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 KIR2DS3Q14952 304 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PPP1R3AQ16821 1122 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GPR149Q86SP6 731 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CPNE8Q86YQ8 564 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PLD6Q8N2A8 252 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 OR9K2Q8NGE7 335 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 FRS2Q8WU20 508 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 C7orf43Q8WVR3 580 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CNOT9Q92600 299 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 TSACCQ96A04 125 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 FAM46AQ96IP4 442 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 METTL2AQ96IZ6 378 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 ZNF681Q96N22 645 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 FCRL3Q96P31 734 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 MAP3K3Q99759 626 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ZNF160Q9HCG1 818 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 INPP5EQ9NRR6 644 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CA14Q9ULX7 337 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 NUBP2Q9Y5Y2 271 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms