RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 UBL4AP11441 157 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 GIFP27352 417 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SOX9P48436 509 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 RAB40BQ12829 278 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TEX261Q6UWH6 196 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 RPTNQ6XPR3 784 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 FAM83HQ6ZRV2 1179 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TRILQ7L0X0 811 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 RRM2BQ7LG56 351 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 NKAIN4Q8IVV8 208 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SIRT6Q8N6T7 355 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 ARIH2OSQ8N7S6 290 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 VN1R2Q8NFZ6 395 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 IGSF21Q96ID5 467 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 METTL2AQ96IZ6 378 aaKnown RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 KCNJ15Q99712 375 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 FUZQ9BT04 418 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 ZFP64Q9NPA5 681 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 A4GALTQ9NPC4 353 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 RASD1Q9Y272 281 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 PPIL1Q9Y3C6 166 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 U3KQ87 197 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TRDV1A0A1B0GX56 115 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM129A0AVI4 362 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 MAGEB4O15481 346 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TEX28O15482 410 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 REM1O75628 298 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 UBXN7O94888 489 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 PRLHRP49683 370 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 PNLIPRP1P54315 467 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 POLR2LP62875 67 aaKnown RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SLC3A1Q07837 685 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 CRYZQ08257 329 aaKnown RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 PRAMEF14Q5SWL7 426 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 PRAMEF13Q5VWM6 474 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 LIX1LQ8IVB5 337 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 FBXL6Q8N531 539 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 OR5P2Q8WZ92 322 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 FGF11Q92914 225 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 KIAA1143Q96AT1 154 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SLC35G5Q96KT7 338 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 C12orf66Q96MD2 445 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 C17orf62Q9BQA9 187 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 MED18Q9BUE0 208 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 TM7SF3Q9NS93 570 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SEMA4GQ9NTN9 838 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 RNF186Q9NXI6 227 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 SPG21Q9NZD8 308 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 CXXC1Q9P0U4 656 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 CHST2Q9Y4C5 530 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 E9PI62 339 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TSPAN4O14817 238 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HLA-DPB1P04440 258 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SELPP16109 830 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 PCSK2P16519 638 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ATF4P18848 351 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TRHRP34981 398 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ACVR1BP36896 505 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 COX10Q12887 443 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TCEA2Q15560 299 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 KLHL12Q53G59 568 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 EOGTQ5NDL2 527 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 LYPD4Q6UWN0 246 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 CHMP1BQ7LBR1 199 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 PRSS45Q7RTY3 260 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 C16orf62Q7Z3J2 963 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 CPOQ8IVL8 374 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 CCDC116Q8IYX3 515 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 TRAM1L1Q8N609 369 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 GALNT6Q8NCL4 622 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HMGB4Q8WW32 186 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 RFT1Q96AA3 541 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ZC3HAV1LQ96H79 300 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ORAI3Q9BRQ5 295 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 CHIAQ9BZP6 476 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 GLIPR2Q9H4G4 154 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 HCFC1R1Q9NWW0 138 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLCO1C1Q9NYB5 712 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SATB2Q9UPW6 733 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 QSOX1O00391 747 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SCAMP1O15126 338 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 POP7O75817 140 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 OR7A10O76100 309 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 ACADMP11310 421 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLC6A1P30531 599 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 FGF9P31371 208 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 RPL3P39023 403 aaKnown RBP9.51□□□□□ -0.89
PTPRA-203ENST00000356147 EFNB1P98172 346 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 DUSP2Q05923 314 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLC25A35Q3KQZ1 300 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 MINDY4Q4G0A6 757 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 C1orf94Q6P1W5 598 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 CDH24Q86UP0 819 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLC43A3Q8NBI5 491 aa9.51□□□□□ -0.89
PTPRA-203ENST00000356147 SLC38A2Q96QD8 506 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms