RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PRPH2P23942 346 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 MC2RQ01718 297 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ASCC1Q8N9N2 400 aaKnown RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 MOAP1Q96BY2 351 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 HSD17B14Q9BPX1 270 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 C14orf119Q9NWQ9 140 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 TCRBV7S3A2A0A539 114 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 F2RL1P55085 397 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 CDKN3Q16667 212 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 PDLIM3Q53GG5 364 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 AGAP7PQ5VUJ5 663 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 AGAP6Q5VW22 663 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ABHD12BQ7Z5M8 362 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 GRAMD2AQ8IUY3 354 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 AGAP4Q96P64 663 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 UHRF1Q96T88 793 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SMIM3Q9BZL3 60 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SIDT1Q9NXL6 827 aaKnown RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SPDEFO95238 335 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 HEXAP06865 529 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 DRD5P21918 477 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 KCNJ11Q14654 390 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SOWAHAQ2M3V2 549 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SEMA4FO95754 770 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 POU3F2P20265 443 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-201ENST00000356083 PTPRRQ15256 657 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SCRN2Q96FV2 425 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 A0A1W2PQ09 198 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 CCL11P51671 97 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 F2RL3Q96RI0 385 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 OPA3Q9H6K4 179 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SFXN1Q9H9B4 322 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 D6RAR5 112 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 HOXA9P31269 272 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 PIGFQ07326 219 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 ELF4Q99607 663 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-201ENST00000356083 DOHHQ9BU89 302 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 POTEKPQ9BYX7 375 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 DOCK9Q9BZ29 2069 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 INTS1Q8N201 2190 aaKnown RBP16.4■□□□□ 0.22
COL27A1-201ENST00000356083 NPIPA5A0A0B4J1W7 369 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 NPIPA7E9PJI5 369 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 HCRTO43612 131 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 NPIPA8P0DM63 369 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 PRDX6P30041 224 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SFRP4Q6FHJ7 346 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-201ENST00000356083 TECPR1Q7Z6L1 1165 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 C7orf26Q96N11 449 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 KCTD3Q9Y597 815 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SOWAHBA6NEL2 793 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 CD300LBA8K4G0 201 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 F8W036 122 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 MANBAO00462 879 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 BLOC1S1P78537 153 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 TGFBR3Q03167 851 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 SGPP2Q8IWX5 399 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 ZFP82Q8N141 532 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 FBXL20Q96IG2 436 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 NGBQ9NPG2 151 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 MAN2B1O00754 1011 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 WNT7AO00755 349 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF829Q3KNS6 432 aaPredicted RBP16.4■□□□□ 0.22
COL27A1-201ENST00000356083 RETREG1Q9H6L5 497 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 GFOD1Q9NXC2 390 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 HEATR5BQ9P2D3 2071 aa16.4■□□□□ 0.22
COL27A1-201ENST00000356083 DVL2O14641 736 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 RGS9O75916 674 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SGSHP51688 502 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 NANOGQ9H9S0 305 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 USP36Q9P275 1121 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 PRSS51A0A1B0GVH4 220 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 EFCAB7A8K855 629 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 RFPL1O75677 317 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 FCER1GP30273 86 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TMEM185AQ8NFB2 350 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SGTBQ96EQ0 304 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TSPAN10Q9H1Z9 355 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 CUTCQ9NTM9 273 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 EXOSC1Q9Y3B2 195 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 PXDNQ92626 1479 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 KDELR3O43731 214 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 DCNP07585 359 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 ITGB8P26012 769 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TBPL1P62380 186 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SIRPAP78324 504 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TGFBIQ15582 683 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 RNF32Q9H0A6 362 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 BTNL10A8MVZ5 291 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SERPINA2P20848 420 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TAS2R20P59543 309 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 PLBD1Q6P4A8 553 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 OR52B2Q96RD2 323 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms