RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 SOX18P35713 384 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 MTNR1AP48039 350 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 SNRPD2P62316 118 aaKnown RBP11.44□□□□□ -0.58
SIRPA-201ENST00000356025 RPS25P62851 125 aaKnown RBP11.44□□□□□ -0.58
SIRPA-201ENST00000356025 PPP2R2DQ66LE6 453 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 SFTPA2Q8IWL1 248 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 ZNF433Q8N7K0 673 aaPredicted RBP11.44□□□□□ -0.58
SIRPA-201ENST00000356025 OR5T3Q8NGG3 340 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 C9orf43Q8TAL5 461 aaPredicted RBP11.44□□□□□ -0.58
SIRPA-201ENST00000356025 C17orf50Q8WW18 174 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 VWCEQ96DN2 955 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 NEURL3Q96EH8 262 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 RSPH9Q9H1X1 276 aaPredicted RBP11.44□□□□□ -0.58
SIRPA-201ENST00000356025 CD93Q9NPY3 652 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 ACSL5Q9ULC5 683 aa11.44□□□□□ -0.58
SIRPA-201ENST00000356025 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 SHC2P98077 582 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 METRNLQ641Q3 311 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ZNF776Q68DI1 518 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TMIEQ8NEW7 156 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ANKK1Q8NFD2 765 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 CNRIP1Q96F85 164 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 OR7D2Q96RA2 312 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 WSB2Q9NYS7 404 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 RPS6KB2Q9UBS0 482 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 SLC7A7Q9UM01 511 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ZFR2Q9UPR6 939 aaKnown RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 N6AMT1Q9Y5N5 214 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 LRIT2A6NDA9 550 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 B4DGG1 531 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 MAGEB4O15481 346 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 SLITRK5O94991 958 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 GABRA3P34903 492 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ETV5P41161 510 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 KCNJ5P48544 419 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ETV1P50549 477 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 LRIT3Q3SXY7 679 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 GXYLT1Q4G148 440 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 OR52E4Q8NGH9 312 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ZNF707Q96C28 371 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 CNDP2Q96KP4 475 aaKnown RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 GABARAPL1Q9H0R8 117 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TNFRSF10DQ9UBN6 386 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 GPR55Q9Y2T6 319 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 A0A1W2PQ09 198 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 DSCR3O14972 297 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 RAB36O95755 333 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ALAS2P22557 587 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 CASP3P42574 277 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 LBX1P52954 281 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ST3GAL3Q11203 375 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 C9orf50Q5SZB4 431 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 ZNF517Q6ZMY9 492 aaPredicted RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 OR6K6Q8NGW6 343 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TMEM255BQ8WV15 326 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 PLA2G2FQ9BZM2 168 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 DDX31Q9H8H2 851 aaKnown RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 HRASLS2Q9NWW9 162 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 SOHLH2Q9NX45 425 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TBC1D29Q9UFV1 150 aa11.43□□□□□ -0.58
SIRPA-201ENST00000356025 TDRD6O60522 2096 aaKnown RBP11.43□□□□□ -0.58
SIRPA-201ENST00000356025 DAPL1A0PJW8 107 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 ATP5A1P25705 553 aaKnown RBP11.42□□□□□ -0.58
SIRPA-201ENST00000356025 NAA10P41227 235 aaPredicted RBP11.42□□□□□ -0.58
SIRPA-201ENST00000356025 PDX1P52945 283 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 TFF2Q03403 129 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 SCN1BQ07699 218 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 STX4Q12846 297 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 GNA13Q14344 377 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 GDPD3Q7L5L3 318 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 BBS1Q8NFJ9 593 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 PIGKQ92643 395 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 KCMF1Q9P0J7 381 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 HCN2Q9UL51 889 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 A0A087WUU8 490 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 SOCS6O14544 535 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 LINC01565O15544 149 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 B3GALT2O43825 422 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 EPHA5P54756 1037 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
SIRPA-201ENST00000356025 DUSP2Q05923 314 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 EIF4HQ15056 248 aaKnown RBP11.42□□□□□ -0.58
SIRPA-201ENST00000356025 QPRTQ15274 297 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 ITPRIPL2Q3MIP1 535 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 FBXO15Q8NCQ5 510 aaPredicted RBP11.42□□□□□ -0.58
SIRPA-201ENST00000356025 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 OR2A1Q8NGT9 310 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
SIRPA-201ENST00000356025 RLN3Q8WXF3 142 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms