RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RNGTTO60942 597 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 APOC1P02654 83 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PTGER1P34995 402 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 COL28A1Q2UY09 1125 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PAN3Q58A45 887 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 SFRP5Q5T4F7 317 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 ANXA8L1Q5VT79 327 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 FBXO46Q6PJ61 603 aaPredicted RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 USP30Q70CQ3 517 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 GPR155Q7Z3F1 870 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 OR52P1PQ8NH57 321 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 RAB8BQ92930 207 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 IRF7Q92985 503 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 HHIPQ96QV1 700 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 DDOQ99489 341 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PITHD1Q9GZP4 211 aaPredicted RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 ZFP64Q9NPA5 681 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 MIEF1Q9NQG6 463 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 NIT2Q9NQR4 276 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 OR6C2Q9NZP2 312 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 KLHL42Q9P2K6 505 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 HCN2Q9UL51 889 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 ERVW-1Q9UQF0 538 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 NOSIPQ9Y314 301 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 H0YIV9 168 aa8.84□□□□□ -1
SMG6-202ENST00000354901 H3BN98 237 aa8.84□□□□□ -1
SMG6-202ENST00000354901 KHNYNO15037 678 aaKnown RBP8.84□□□□□ -1
SMG6-202ENST00000354901 EEF1E1O43324 174 aaKnown RBP8.84□□□□□ -1
SMG6-202ENST00000354901 FGF18O76093 207 aa8.84□□□□□ -1
SMG6-202ENST00000354901 STATHP02808 62 aa8.84□□□□□ -1
SMG6-202ENST00000354901 LPLP06858 475 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ZNF3P17036 446 aa8.84□□□□□ -1
SMG6-202ENST00000354901 GGT2P36268 569 aa8.84□□□□□ -1
SMG6-202ENST00000354901 CLDN20P56880 219 aa8.84□□□□□ -1
SMG6-202ENST00000354901 CDK6Q00534 326 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ZNF763Q0D2J5 394 aa8.84□□□□□ -1
SMG6-202ENST00000354901 SPHARQ15513 63 aa8.84□□□□□ -1
SMG6-202ENST00000354901 HENMT1Q5T8I9 393 aaKnown RBP8.84□□□□□ -1
SMG6-202ENST00000354901 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -1
SMG6-202ENST00000354901 MSANTD1Q6ZTZ1 278 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ATCAYQ86WG3 371 aa8.84□□□□□ -1
SMG6-202ENST00000354901 TRIM69Q86WT6 500 aa8.84□□□□□ -1
SMG6-202ENST00000354901 MOSPD2Q8NHP6 518 aa8.84□□□□□ -1
SMG6-202ENST00000354901 CHTF18Q8WVB6 975 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -1
SMG6-202ENST00000354901 SFXN2Q96NB2 322 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ZNF285Q96NJ3 590 aa8.84□□□□□ -1
SMG6-202ENST00000354901 REEP4Q9H6H4 257 aa8.84□□□□□ -1
SMG6-202ENST00000354901 C11orf49Q9H6J7 331 aa8.84□□□□□ -1
SMG6-202ENST00000354901 HEXA-AS1Q9H8Q6 139 aa8.84□□□□□ -1
SMG6-202ENST00000354901 TBC1D17Q9HA65 648 aa8.84□□□□□ -1
SMG6-202ENST00000354901 ZNF282Q9UDV7 671 aaPredicted RBP8.84□□□□□ -1
SMG6-202ENST00000354901 RPH3AQ9Y2J0 694 aaPredicted RBP8.84□□□□□ -1
SMG6-202ENST00000354901 PPIL1Q9Y3C6 166 aa8.84□□□□□ -1
SMG6-202ENST00000354901 DYRK1BQ9Y463 629 aa8.84□□□□□ -1
SMG6-202ENST00000354901 KLK4Q9Y5K2 254 aa8.84□□□□□ -1
SMG6-202ENST00000354901 TPST2O60704 377 aa8.83□□□□□ -1
SMG6-202ENST00000354901 LDOC1O95751 146 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 IL3P08700 152 aa8.83□□□□□ -1
SMG6-202ENST00000354901 IGFBP1P08833 259 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 CSF2RAP15509 400 aa8.83□□□□□ -1
SMG6-202ENST00000354901 FLI1Q01543 452 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 FGL1Q08830 312 aa8.83□□□□□ -1
SMG6-202ENST00000354901 KCNC3Q14003 757 aa8.83□□□□□ -1
SMG6-202ENST00000354901 PRSS53Q2L4Q9 553 aa8.83□□□□□ -1
SMG6-202ENST00000354901 MPEG1Q2M385 716 aa8.83□□□□□ -1
SMG6-202ENST00000354901 GLYR1Q49A26 553 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 RAET1GQ6H3X3 334 aa8.83□□□□□ -1
SMG6-202ENST00000354901 SHFQ7M4L6 423 aa8.83□□□□□ -1
SMG6-202ENST00000354901 OLIG3Q7RTU3 272 aa8.83□□□□□ -1
SMG6-202ENST00000354901 C11orf96Q7Z7L8 435 aa8.83□□□□□ -1
SMG6-202ENST00000354901 CCDC36Q8IYA8 594 aa8.83□□□□□ -1
SMG6-202ENST00000354901 AQP11Q8NBQ7 271 aa8.83□□□□□ -1
SMG6-202ENST00000354901 HMGB4Q8WW32 186 aa8.83□□□□□ -1
SMG6-202ENST00000354901 MS4A3Q96HJ5 214 aa8.83□□□□□ -1
SMG6-202ENST00000354901 LMLNQ96KR4 655 aa8.83□□□□□ -1
SMG6-202ENST00000354901 EPYCQ99645 322 aa8.83□□□□□ -1
SMG6-202ENST00000354901 ABCG4Q9H172 646 aa8.83□□□□□ -1
SMG6-202ENST00000354901 METTL17Q9H7H0 456 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 ZNF226Q9NYT6 803 aa8.83□□□□□ -1
SMG6-202ENST00000354901 MRPL15Q9P015 296 aaKnown RBP8.83□□□□□ -1
SMG6-202ENST00000354901 NFKBIL1Q9UBC1 381 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 TRBC2A0A5B9 178 aa8.83□□□□□ -1
SMG6-202ENST00000354901 RFXAPO00287 272 aa8.83□□□□□ -1
SMG6-202ENST00000354901 KIAA0355O15063 1070 aa8.83□□□□□ -1
SMG6-202ENST00000354901 PCGF2P35227 344 aa8.83□□□□□ -1
SMG6-202ENST00000354901 PPM1AP35813 382 aa8.83□□□□□ -1
SMG6-202ENST00000354901 AKR1C2P52895 323 aa8.83□□□□□ -1
SMG6-202ENST00000354901 AKR1C1Q04828 323 aa8.83□□□□□ -1
SMG6-202ENST00000354901 MESP2Q0VG99 397 aa8.83□□□□□ -1
SMG6-202ENST00000354901 RBMS2Q15434 407 aaKnown RBP8.83□□□□□ -1
SMG6-202ENST00000354901 SPIN4Q56A73 249 aa8.83□□□□□ -1
SMG6-202ENST00000354901 PLPP4Q5VZY2 271 aa8.83□□□□□ -1
SMG6-202ENST00000354901 ZDHHC20Q5W0Z9 365 aa8.83□□□□□ -1
SMG6-202ENST00000354901 UNC5DQ6UXZ4 953 aa8.83□□□□□ -1
SMG6-202ENST00000354901 LNX2Q8N448 690 aa8.83□□□□□ -1
SMG6-202ENST00000354901 TRAM1L1Q8N609 369 aa8.83□□□□□ -1
SMG6-202ENST00000354901 C11orf24Q96F05 449 aaPredicted RBP8.83□□□□□ -1
SMG6-202ENST00000354901 LRRC46Q96FV0 321 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms