RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ENTPD8Q5MY95 495 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 ATAD3CQ5T2N8 411 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 RAB43Q86YS6 212 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 NRMQ8IXM6 262 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 NLGN4YQ8NFZ3 816 aaPredicted RBP18.34■□□□□ 0.53
COL13A1-201ENST00000354547 CLCA2Q9UQC9 943 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 BOLA1Q9Y3E2 137 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 GON4LQ3T8J9 2241 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 EYSQ5T1H1 3165 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 TTC36A6NLP5 189 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 CASKO14936 926 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 UBXN7O94888 489 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 ACADMP11310 421 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 PDX1P52945 283 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 CDH11P55287 796 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 FABP5Q01469 135 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 C6orf183Q5T699 404 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 PLEKHM3Q6ZWE6 761 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 UBQLNLQ8IYU4 475 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 SLC16A11Q8NCK7 471 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 OR2L5Q8NG80 312 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 ZCCHC10Q8TBK6 192 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 SLC38A2Q96QD8 506 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 PINK1Q9BXM7 581 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 BCL2L10Q9HD36 194 aa18.34■□□□□ 0.53
COL13A1-201ENST00000354547 SLC30A4O14863 429 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 CELP19835 753 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 PEBP1P30086 187 aaKnown RBP18.33■□□□□ 0.53
COL13A1-201ENST00000354547 PKLRP30613 574 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 TRIM23P36406 574 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 ABI3BPQ7Z7G0 1075 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 SHISA5Q8N114 240 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 ELP4Q96EB1 424 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 KATNB1Q9BVA0 655 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 N6AMT1Q9Y5N5 214 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 ZNF780BQ9Y6R6 833 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 VCANP13611 3396 aa18.33■□□□□ 0.53
COL13A1-201ENST00000354547 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 CEACAM5P06731 702 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 ANXA11P50995 505 aaKnown RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TRA2BP62995 288 aaKnown RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TMEM35AQ53FP2 167 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 CCNJQ5T5M9 372 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF544Q6NX49 715 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 SLC48A1Q6P1K1 146 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TTLQ8NG68 377 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TMEM255BQ8WV15 326 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 ZFPM2Q8WW38 1151 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 UFD1Q92890 307 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 EFHD2Q96C19 240 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 GIMAP4Q9NUV9 329 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TRAPPC4Q9Y296 219 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 CHST2Q9Y4C5 530 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 MN1Q10571 1320 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 SLC35F4A4IF30 521 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 BTN3A3O00478 584 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 EMC8O43402 210 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 IDH3BO43837 385 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 LIMS3P0CW19 117 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 LIMS4P0CW20 117 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 F3P13726 295 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 FUT1P19526 365 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 GSTM3P21266 225 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 GAS1P54826 345 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 MRPS15P82914 257 aaKnown RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 SCN1BQ07699 218 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 RUNX3Q13761 415 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TRAM2Q15035 370 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 HSDL2Q6YN16 418 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 TRIM48Q8IWZ4 208 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 OR56A1Q8NGH5 318 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 OR2L8Q8NGY9 312 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 OR6F1Q8NGZ6 308 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 GNPDA2Q8TDQ7 276 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 ADAMTS15Q8TE58 950 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 UBASH3BQ8TF42 649 aa18.33■□□□□ 0.52
COL13A1-201ENST00000354547 POLMQ9NP87 494 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-201ENST00000354547 C2orf92A0A1B0GVN3 265 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 A0A1W2PQU0 124 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 ZIC2O95409 532 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-201ENST00000354547 SLC9A3P48764 834 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 GPR50Q13585 617 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 GNA13Q14344 377 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 ZIC1Q15915 447 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 FAM111BQ6SJ93 734 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 SMARCD3Q6STE5 483 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 CD300LDQ6UXZ3 194 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 MTSS1LQ765P7 747 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 TMEFF1Q8IYR6 380 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 ATP6V1C2Q8NEY4 427 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 OR4Q3Q8NH05 313 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 TBX5Q99593 518 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 MCHR1Q99705 422 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 C11orf54Q9H0W9 315 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-201ENST00000354547 IL1AP01583 271 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 CSF3P09919 207 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 AK4P27144 223 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-201ENST00000354547 PLK5Q496M5 336 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms