RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 UBQLN3Q9H347 655 aa20.23■□□□□ 0.83
SNX3-202ENST00000349379 NEUROD4Q9HD90 331 aa20.23■□□□□ 0.83
SNX3-202ENST00000349379 CBLCQ9ULV8 474 aa20.23■□□□□ 0.83
SNX3-202ENST00000349379 OR10H1Q9Y4A9 318 aa20.23■□□□□ 0.83
SNX3-202ENST00000349379 LIPGQ9Y5X9 500 aa20.23■□□□□ 0.83
SNX3-202ENST00000349379 GOLGA8QA0A0J9YX86 632 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 A0A1B0GVC2 190 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 GOLGA8OA6NCC3 632 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 PRAMEF25A6NGN4 478 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 GOLGA8NF8WBI6 632 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 ZNHIT1O43257 154 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 SCN2BO60939 215 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 C6orf47O95873 294 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 CELA3AP09093 270 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 PRR5P85299 388 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 C3AR1Q16581 482 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 LSM12Q3MHD2 195 aaKnown RBP20.22■□□□□ 0.83
SNX3-202ENST00000349379 SLC9B1Q4ZJI4 515 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 TMEM198Q66K66 360 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 MFSD12Q6NUT3 480 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 ARHGAP11AQ6P4F7 1023 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 ZCCHC12Q6PEW1 402 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 TRILQ7L0X0 811 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 CDRT4Q8N9R6 151 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 ACTRT2Q8TDY3 377 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 TMCO6Q96DC7 493 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 OSBPL11Q9BXB4 747 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 CXorf36Q9H7Y0 433 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 METTL7AQ9H8H3 244 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 Q9N2J8 555 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 SLCO1B3Q9NPD5 702 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 EQTNQ9NQ60 294 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 INTS9Q9NV88 658 aaKnown RBP20.22■□□□□ 0.83
SNX3-202ENST00000349379 GPR45Q9Y5Y3 372 aa20.22■□□□□ 0.83
SNX3-202ENST00000349379 SPTBN1Q01082 2364 aaKnown RBP20.22■□□□□ 0.83
SNX3-202ENST00000349379 SPTAN1Q13813 2472 aaKnown RBP20.21■□□□□ 0.83
SNX3-202ENST00000349379 ARHGAP21Q5T5U3 1957 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 RNASET2O00584 256 aaKnown RBP20.21■□□□□ 0.83
SNX3-202ENST00000349379 ADAM10O14672 748 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 CDC40O60508 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNX3-202ENST00000349379 ICOSLGO75144 302 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 ACP2P11117 423 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 IL12BP29460 328 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 KRT20P35900 424 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 PHC1P78364 1004 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 SLC10A1Q14973 349 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 DPY19L1Q2PZI1 675 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 OR4F3Q6IEY1 312 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 PAOXQ6QHF9 649 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 PACS2Q86VP3 889 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 EFHD2Q96C19 240 aaPredicted RBP20.21■□□□□ 0.83
SNX3-202ENST00000349379 PSMG3-AS1Q96PY0 264 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 ACKR4Q9NPB9 350 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 ZCCHC3Q9NUD5 404 aaKnown RBP20.21■□□□□ 0.83
SNX3-202ENST00000349379 TINAGQ9UJW2 476 aa20.21■□□□□ 0.83
SNX3-202ENST00000349379 USP9YO00507 2555 aaPredicted RBP20.2■□□□□ 0.82
SNX3-202ENST00000349379 TRGV8A0A0C4DH27 118 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 SNPHO15079 494 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 IL33O95760 270 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 CYP4B1P13584 511 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 ABOP16442 354 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 GABRA3P34903 492 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 PTGS2P35354 604 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 KIR3DL1P43629 444 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 CLNS1AP54105 237 aaKnown RBP20.2■□□□□ 0.82
SNX3-202ENST00000349379 PRKAG1P54619 331 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 GAS1P54826 345 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 HBA1P69905 142 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 MRPS22P82650 360 aaKnown RBP20.2■□□□□ 0.82
SNX3-202ENST00000349379 DECR1Q16698 335 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 TIGD3Q6B0B8 471 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 FJX1Q86VR8 437 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 SLC16A11Q8NCK7 471 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 FAM57AQ8TBR7 257 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 SFXN5Q8TD22 340 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 CKAP2Q8WWK9 683 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 TEX37Q96LM6 180 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 ACBD3Q9H3P7 528 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 B4GALT7Q9UBV7 327 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 C15orf41Q9Y2V0 281 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 USH1CQ9Y6N9 552 aa20.2■□□□□ 0.82
SNX3-202ENST00000349379 GXYLT2A0PJZ3 443 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 AQP7O14520 342 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 SUSD5O60279 629 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 HCN1O60741 890 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 PDE9AO76083 593 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 HMGN2P05204 90 aaKnown RBP20.19■□□□□ 0.82
SNX3-202ENST00000349379 ELAVL4P26378 380 aaKnown RBP20.19■□□□□ 0.82
SNX3-202ENST00000349379 PTPN6P29350 595 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 MASP1P48740 699 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 CCT3P49368 545 aaKnown RBP20.19■□□□□ 0.82
SNX3-202ENST00000349379 PRIM2P49643 509 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 PER3P56645 1201 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 UFM1P61960 85 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 DUSP5Q16690 384 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 PGS1Q32NB8 556 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 VPS26BQ4G0F5 336 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 SPANXN4Q5MJ08 99 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 EPGNQ6UW88 154 aa20.19■□□□□ 0.82
SNX3-202ENST00000349379 DOLPP1Q86YN1 238 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms