RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MC3RP41968 323 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 PRKAG1P54619 331 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 GPR85P60893 370 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 RNF4P78317 190 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 CEBPEQ15744 281 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 RUNDC3AQ59EK9 446 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 NANOGP8Q6NSW7 305 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 IL20RBQ6UXL0 311 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 GFRALQ6UXV0 394 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 TRIML2Q8N7C3 387 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 RIT1Q92963 219 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 SCMH1Q96GD3 660 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 SENP5Q96HI0 755 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 ANKRD27Q96NW4 1050 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 CDRT15Q96T59 188 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 HOPXQ9BPY8 73 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 CPPED1Q9BRF8 314 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 GPATCH1Q9BRR8 931 aaKnown RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 THUMPD3Q9BV44 507 aaKnown RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 CADM1Q9BY67 442 aaKnown RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 PIF1Q9H611 641 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 NANOGQ9H9S0 305 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 NEUROD4Q9HD90 331 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 SIRT3Q9NTG7 399 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 MYOTQ9UBF9 498 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 YARS2Q9Y2Z4 477 aaKnown RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 L3MBTL1Q9Y468 752 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 POLEQ07864 2286 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 MYO7BQ6PIF6 2116 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 NINQ8N4C6 2090 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 TRBV5-3A0A0A0MS03 114 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 CLIC1O00299 241 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 GSC2O15499 205 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 NME2P1O60361 137 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 OR6B1O95007 311 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 NPPAP01160 153 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 SLC35E2P0CK97 266 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 HOXB9P17482 250 aaPredicted RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 NME2P22392 152 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 UQCRC2P22695 453 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 SLC6A2P23975 617 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 RFC3P40938 356 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 CCT3P49368 545 aaKnown RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 MEOX1P50221 254 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 KCNJ2P63252 427 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 ALDH6A1Q02252 535 aaKnown RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■□□□□ 8.5
TPM4-202ENST00000344824 BIKQ13323 160 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 MLC1Q15049 377 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 C8orf82Q6P1X6 216 aaPredicted RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 SLC29A4Q7RTT9 530 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 OR5L2Q8NGL0 311 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 GOT1L1Q8NHS2 421 aaPredicted RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 FBXL20Q96IG2 436 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 SLX1AQ9BQ83 275 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 IKZF5Q9H5V7 419 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 SPAG4Q9NPE6 437 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 EQTNQ9NQ60 294 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 ZCCHC3Q9NUD5 404 aaKnown RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 CMTM6Q9NX76 183 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 KLF13Q9Y2Y9 288 aaPredicted RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
TPM4-202ENST00000344824 UTP20O75691 2785 aaKnown RBP12.73□□□□□ -0.37
TPM4-202ENST00000344824 C15orf38-AP3S2A0A0A6YYH1 394 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 NPIPA5E9PKD4 350 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 G3V3Y1 287 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 NME4O00746 187 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 SEMA7AO75326 666 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ATP1B1P05026 303 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 CT62P0C5K7 136 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ZCCHC18P0CG32 403 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ZNF24P17028 368 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 TCN1P20061 433 aaPredicted RBP12.72□□□□□ -0.37
TPM4-202ENST00000344824 MST1P26927 711 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 SSTR4P31391 388 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 TDGF1P3P51864 188 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 EXOSC7Q15024 291 aaKnown RBP12.72□□□□□ -0.37
TPM4-202ENST00000344824 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ARPINQ7Z6K5 226 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 IFNEQ86WN2 208 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 SLC15A3Q8IY34 581 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 OR7G2Q8NG99 324 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 SLC22A8Q8TCC7 542 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ELP4Q96EB1 424 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms