RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 IFNA1P01562 189 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 ACPPP15309 386 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 PIGAP37287 484 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 HMGN2P46Q86SG4 172 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 SH3RF2Q8TEC5 729 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 SMAP2Q8WU79 429 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 TRIM64A6NGJ6 449 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 TRIM64BA6NI03 449 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 LDB2O43679 373 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 RACK1P63244 317 aaKnown RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 SOX4Q06945 474 aaPredicted RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 UPP1Q16831 310 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 ZFAND1Q8TCF1 268 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 SAMD8Q96LT4 415 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 INPP5EQ9NRR6 644 aa17.14■□□□□ 0.33
SMC4-201ENST00000344722 AK6Q9Y3D8 172 aaKnown RBP17.14■□□□□ 0.33
SMC4-201ENST00000344722 ZNF726A6NNF4 738 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 CTNNB1P35222 781 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 NUDT1P36639 197 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 SLC6A9P48067 706 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 TAS2R38P59533 333 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 MGAT3Q09327 533 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 ACSM3Q53FZ2 586 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 OR5AK2Q8NH90 309 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 HAVCR2Q8TDQ0 301 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 SLC39A13Q96H72 371 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 A0A0D9SG52 128 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 TMEM150CB9EJG8 249 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 NFYAP23511 347 aaPredicted RBP17.13■□□□□ 0.33
SMC4-201ENST00000344722 LYPD4Q6UWN0 246 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 RFPL4BQ6ZWI9 263 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 WDSUB1Q8N9V3 476 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 CCDC54Q8NEL0 328 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 OR52E2Q8NGJ4 325 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 SAP130Q9H0E3 1048 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 EPHA6Q9UF33 1036 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 TSTD3H0UI37 97 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 ZNF35P13682 527 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 PTBP1P26599 531 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMC4-201ENST00000344722 GP2P55259 537 aaKnown RBP17.13■□□□□ 0.33
SMC4-201ENST00000344722 FCN2Q15485 313 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 TMEM107Q6UX40 140 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 C12orf45Q8N5I9 185 aaPredicted RBP17.13■□□□□ 0.33
SMC4-201ENST00000344722 ESX1Q8N693 406 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 SCGB1C1Q8TD33 95 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 ZNF304Q9HCX3 659 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 TXNL4BQ9NX01 149 aaKnown RBP17.13■□□□□ 0.33
SMC4-201ENST00000344722 MTMR11A4FU01 709 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 GKP32189 559 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 FUNDC1Q8IVP5 155 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 OR6V1Q8N148 313 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 ZNF559Q9BR84 538 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 URM1Q9BTM9 101 aaKnown RBP17.13■□□□□ 0.33
SMC4-201ENST00000344722 SYNPO2LQ9H987 977 aa17.13■□□□□ 0.33
SMC4-201ENST00000344722 RAB3DO95716 219 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 NR2C1P13056 603 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 PTPN2P17706 415 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 AMY2BP19961 511 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 CCKBRP32239 447 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 SOX9P48436 509 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 TAS2R31P59538 309 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ISL1P61371 349 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 MAP4K2Q12851 820 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 AKR1C8PQ5T2L2 129 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 Q6ZVL8 140 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 TMEM150AQ86TG1 271 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 POLHQ9Y253 713 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 POM121CA8CG34 1229 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 POLR1CO15160 346 aaPredicted RBP17.12■□□□□ 0.33
SMC4-201ENST00000344722 TXNL1O43396 289 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ZNF674Q2M3X9 581 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 TBPL2Q6SJ96 375 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ALKAL2Q6UX46 152 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 VITQ6UXI7 678 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 Q6ZPB1 254 aaPredicted RBP17.12■□□□□ 0.33
SMC4-201ENST00000344722 IDO2Q6ZQW0 420 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 GDPD3Q7L5L3 318 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 PHOSPHO1Q8TCT1 267 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 F2RL3Q96RI0 385 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 TREX2Q9BQ50 279 aaPredicted RBP17.12■□□□□ 0.33
SMC4-201ENST00000344722 WDR83Q9BRX9 315 aaKnown RBP17.12■□□□□ 0.33
SMC4-201ENST00000344722 SLC5A7Q9GZV3 580 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 GJD2Q9UKL4 321 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 CLEC4EQ9ULY5 219 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 hCG_1807616A0A1W2PRN6 198 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 CASC3O15234 703 aaKnown RBP17.12■□□□□ 0.33
SMC4-201ENST00000344722 AK1P00568 194 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 DYRK1AQ13627 763 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ZNF454Q8N9F8 522 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 GALNT9Q9HCQ5 603 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 PRDM9Q9NQV7 894 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 SPO11Q9Y5K1 396 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 M0R3H8 397 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 OIP5O43482 229 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 LALBAP00709 142 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms