RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ABCB7O75027 752 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 CSTBP04080 98 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 GLB1P16278 677 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 CR2P20023 1033 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 MAPK3P27361 379 aaPredicted RBP15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 PTGER1P34995 402 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 METAP1P53582 386 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 ATP6AP1Q15904 470 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 SWT1Q5T5J6 900 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 ZADH2Q8N4Q0 377 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 CIDECQ96AQ7 238 aaPredicted RBP15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 FAM117AQ9C073 453 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 WDR12Q9GZL7 423 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 TRPV5Q9NQA5 729 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 SERGEFQ9UGK8 458 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 KLHL21Q9UJP4 597 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 VDAC3Q9Y277 283 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 TMEM14AQ9Y6G1 99 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 RGPD4Q7Z3J3 1758 aa15.46■□□□□ 0.06
SMARCA4-201ENST00000344626 IQCMA0A1B0GVH7 501 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 OR5K3A6NET4 321 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 GFRA3O60609 400 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ARL6IP5O75915 188 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 BMP1P13497 986 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 MVKQ03426 396 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC35F1Q5T1Q4 408 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PAPD4Q6PIY7 484 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PLEKHG7Q6ZR37 379 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 UBXN10Q96LJ8 280 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PDCD10Q9BUL8 212 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 NPLQ9BXD5 320 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 MMACHCQ9Y4U1 282 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 LOC110117498-PIK3R3F6TDL0 507 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 APOC1P02654 83 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ITIH1P19827 911 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC5A12Q1EHB4 618 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ARHGAP11AQ6P4F7 1023 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PSMA8Q8TAA3 256 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 EIF3KQ9UBQ5 218 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 GLS2Q9UI32 602 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 MCTS1Q9ULC4 181 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 IGHV1OR15-9A0A0B4J2B8 117 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 SPTY2D1-AS1A0A0U1RR47 76 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 FTCDNL1E5RQL4 147 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PSMD9O00233 223 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 GABREP78334 506 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 OR6N2Q8NGY6 317 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 SETD6Q8TBK2 473 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 STON2Q8WXE9 905 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ACSS1Q9NUB1 689 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 EXOSC1Q9Y3B2 195 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 MYH15Q9Y2K3 1946 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 GXYLT2A0PJZ3 443 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 J3QLW9 94 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 FANCGO15287 622 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ZNF19P17023 458 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 CHAF1BQ13112 559 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 NKAIN1Q4KMZ8 207 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 NLRP8Q86W28 1048 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 UEVLDQ8IX04 471 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 OR51A7Q8NH64 312 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 ZNF578Q96N58 590 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 PKP2Q99959 881 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 GNG8Q9UK08 70 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 SPATA2Q9UM82 520 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 FER1L6Q2WGJ9 1857 aa15.45■□□□□ 0.06
SMARCA4-201ENST00000344626 CTSLP07711 333 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 OR12D2P58182 307 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 RAB15P59190 212 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TNFRSF17Q02223 184 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 DCTN2Q13561 401 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 DEFB109BQ30KR1 87 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 CNEP1R1Q8N9A8 125 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TCEAL3Q969E4 200 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 OMA1Q96E52 524 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 COQ10AQ96MF6 247 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 ADOQ96SZ5 270 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 WASH6PQ9NQA3 447 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 MKRN2OSH3BPM6 223 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 C8BP07358 591 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 COL9A1P20849 921 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC9A3P48764 834 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 FOXA1P55317 472 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 PPP1R8Q12972 351 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TIGD6Q17RP2 521 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 EXOC3L2Q2M3D2 409 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 CARD17Q5XLA6 110 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 RSPRY1Q96DX4 576 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 C11orf24Q96F05 449 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 DIRAS2Q96HU8 199 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 PINK1Q9BXM7 581 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 DIABLOQ9NR28 239 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 ABCB10Q9NRK6 738 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 CBLCQ9ULV8 474 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 H6PDO95479 791 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 MT-ND5P03915 603 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 SPARCP09486 303 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 ZNF43P17038 809 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms