RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR51F2Q8NH61 342 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 UBTD2Q8WUN7 234 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 EXO1Q9UQ84 846 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 CEP170Q5SW79 1584 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 A0A0U1RQS6 177 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 UBE2CO00762 179 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ANXA7P20073 488 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ATXN7L2Q5T6C5 722 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM65Q6PI78 240 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 GPR149Q86SP6 731 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 AQP11Q8NBQ7 271 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 OR13C4Q8NGS5 318 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SHISA4Q96DD7 197 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 NANOGQ9H9S0 305 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF286AQ9HBT8 521 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 NDUFB9Q9Y6M9 179 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 U3KQV3 271 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA1210Q9ULL0 1709 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 A0A087X0M5 115 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1B0GX30 115 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 B4DEV8 164 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PRKCHP24723 683 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PCSK6P29122 969 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RPS10P46783 165 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RENBPP51606 427 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 HTD2P86397 168 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 DUOXA2Q1HG44 320 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 CD300LGQ6UXG3 332 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ACOT1Q86TX2 421 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 FUBP3Q96I24 572 aaKnown RBP eCLIP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A31Q9H0C2 315 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RAB9BQ9NP90 201 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ACP6Q9NPH0 428 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ISM1B1AKI9 464 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PMCHP20382 165 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 TUBG1P23258 451 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PRPH2P23942 346 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RBMS1P29558 406 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R19P59542 299 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 LARS2Q15031 903 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 STEAP1BQ6NZ63 245 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF584Q8IVC4 421 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ASB11Q8WXH4 323 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ARSGQ96EG1 525 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PORCNQ9H237 461 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SLCO5A1Q9H2Y9 848 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RNF122Q9H9V4 155 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 STEAP1Q9UHE8 339 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ARHGEF5Q12774 1597 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SLC31A1O15431 190 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SYT7O43581 403 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A12O75746 678 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 JTBO76095 146 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 ASPAP45381 313 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SH3BP2P78314 561 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 MEP1AQ16819 746 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 CAMKMTQ7Z624 323 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 OR4F6Q8NGB9 312 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 LNX1Q8TBB1 728 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 CNTN3Q9P232 1028 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 POLR1DQ9Y2S0 133 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 MAP4K5Q9Y4K4 846 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 EEF1E1-BLOC1S5C9J1V9 151 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 C6P13671 934 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA0141Q14154 515 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 COX19Q49B96 90 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 NADSYN1Q6IA69 706 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 RAB37Q96AX2 223 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 PABPC5Q96DU9 382 aaKnown RBP3.59□□□□□ -1.84
SYNE2-202ENST00000344113 SLC22A12Q96S37 553 aa3.59□□□□□ -1.84
SYNE2-202ENST00000344113 CBR3O75828 277 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HLA-DQB1P01920 261 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DBIP07108 87 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ELK1P19419 428 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PBLDP30039 288 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PXNP49023 591 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MAMLD1Q13495 774 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 WDR73Q6P4I2 378 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FBLIM1Q8WUP2 373 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TGM7Q96PF1 710 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 XYLT2Q9H1B5 865 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MTIF3Q9H2K0 278 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ASF1BQ9NVP2 202 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ABCA4P78363 2273 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 XKRYO14609 159 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GPSM1Q86YR5 675 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 C11orf70Q9BRQ4 267 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DDX31Q9H8H2 851 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PCDHB11Q9Y5F2 797 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1W2PRB8 838 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PEX10O60683 326 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SERPINA7P05543 415 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ASGR1P07306 291 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PRRX1P54821 245 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC6A3Q01959 620 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 IGSF1Q8N6C5 1336 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 COQ10BQ9H8M1 238 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MED17Q9NVC6 651 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R16Q9NYV7 291 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ING1Q9UK53 422 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms