RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DVL2O14641 736 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ATG13O75143 517 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 EPPINO95925 133 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 C1GALT1C1LP0DN25 315 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ACP5P13686 325 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 CD53P19397 219 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 HTR1FP30939 366 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TBPL1P62380 186 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 LSM11P83369 360 aaKnown RBP eCLIP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 CRYZQ08257 329 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TSPAN31Q12999 210 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF791Q3KP31 576 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 RTP2Q5QGT7 225 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 BHLHB9Q6PI77 547 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 Q6ZNB5 142 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 GNPDA2Q8TDQ7 276 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 PCNPQ8WW12 178 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 GIMAP1Q8WWP7 306 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 PTP4A1Q93096 173 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 PMEPA1Q969W9 287 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF764Q96H86 408 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 LINC00052Q96N35 136 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TREX2Q9BQ50 279 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SGPP1Q9BX95 441 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 MIEF1Q9NQG6 463 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF624Q9P2J8 865 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZFR2Q9UPR6 939 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 LOC105369274A0A096LPK9 316 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 PRAMEF27A3QJZ7 478 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 OR6C65A6NJZ3 312 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SAP18O00422 153 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 MTX2O75431 263 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TGFB1P01137 390 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SRP9P49458 86 aaKnown RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 MMP15P51511 669 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 DBPQ10586 325 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SFXN4Q6P4A7 337 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 WASH2PQ6VEQ5 465 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 LIPIQ6XZB0 460 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 B3GLCTQ6Y288 498 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 C6orf120Q7Z4R8 191 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TECPR1Q7Z6L1 1165 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 OR4N4Q8N0Y3 316 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SAMD12Q8N8I0 201 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 OR56B4Q8NH76 319 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 RAB8BQ92930 207 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 FOXJ1Q92949 421 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 CACNG6Q9BXT2 260 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF436Q9C0F3 470 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 ACTR6Q9GZN1 396 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 TMEM168Q9H0V1 697 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SDHAF2Q9NX18 166 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 KLF15Q9UIH9 416 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 FBXO9Q9UK97 447 aaPredicted RBP9.08□□□□□ -0.96
HOXA1-201ENST00000343060 SLC9A8Q9Y2E8 581 aa9.08□□□□□ -0.96
HOXA1-201ENST00000343060 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 ANKDD1BA6NHY2 528 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 A8MXK9 166 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SURF4O15260 269 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 WDPCPO95876 746 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SYPP08247 313 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 CTSAP10619 480 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 NPPBP16860 134 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 C4BPBP20851 252 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 GIFP27352 417 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 LCN1P31025 176 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 NUP62P37198 522 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 PCBP4P57723 403 aaKnown RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 VSX2P58304 361 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 CNTN1Q12860 1018 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 DYRK1AQ13627 763 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 IER5LQ5T953 404 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 FUT10Q6P4F1 479 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 IL20RBQ6UXL0 311 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TPRA1Q86W33 373 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SIAH3Q8IW03 269 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF687Q8N1G0 1237 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF480Q8WV37 535 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SMPDL3AQ92484 453 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 COQ10AQ96MF6 247 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 PTPN18Q99952 460 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 DPYSL5Q9BPU6 564 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SUV39H2Q9H5I1 410 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 LDAHQ9H6V9 325 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 NFKBIL1Q9UBC1 381 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 P2RX2Q9UBL9 471 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 B4GALT6Q9UBX8 382 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 RASD1Q9Y272 281 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 TMEM5Q9Y2B1 443 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 A0A087WUU8 490 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
HOXA1-201ENST00000343060 GSTZ1O43708 216 aaPredicted RBP9.07□□□□□ -0.96
HOXA1-201ENST00000343060 SNAPC5O75971 98 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms