RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 HOXA9P31269 272 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 GMFBP60983 142 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 B4GALNT1Q00973 533 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 DEFA5Q01523 94 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 CHRNEQ04844 493 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 CDKL4Q5MAI5 379 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 OLFML2AQ68BL7 652 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 RETREG1Q9H6L5 497 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ELL3Q9HB65 397 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 H3BNC9 293 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 RCBTB2O95199 551 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ANXA3P12429 323 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 CCL5P13501 91 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 PON3Q15166 354 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ERN2Q76MJ5 926 aaKnown RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 TMEFF1Q8IYR6 380 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 METTL27Q8N6F8 245 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 FBXO15Q8NCQ5 510 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 SUN3Q8TAQ9 357 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ZMYND19Q96E35 227 aaPredicted RBP11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 TAS2R10Q9NYW0 307 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF639Q9UID6 485 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 OSGIN1Q9UJX0 560 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 ALG5Q9Y673 324 aa11.73□□□□□ -0.53
SNRNP48-201ENST00000342415 M0R233 179 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 PPM1DO15297 605 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 PAHP00439 452 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 IFNA7P01567 189 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GABRA3P34903 492 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GRK5P34947 590 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 TP53I3Q53FA7 332 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 RPLP0P6Q8NHW5 317 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ISG20Q96AZ6 181 aaKnown RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 PHF11Q9UIL8 331 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 BAIAP2Q9UQB8 552 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 CCDC88CQ9P219 2028 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 SCG5P05408 212 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 CD22P20273 847 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ELAVL4P26378 380 aaKnown RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GBX1Q14549 363 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 HES5Q5TA89 166 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 THEM6Q8WUY1 208 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 CTRCQ99895 268 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 MVB12BQ9H7P6 319 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GPN1Q9HCN4 374 aaPredicted RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 NOX1Q9Y5S8 564 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 A0A1W2PRQ8 180 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC25A12O75746 678 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 FBXO45P0C2W1 286 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GIFP27352 417 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 GGTA1PQ4G0N0 100 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF542PQ5EBM4 170 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF761Q86XN6 746 aaPredicted RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 TCEAL8Q8IYN2 117 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 LINC00471Q8N535 108 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 CWH43Q9H720 699 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 SRA1Q9HD15 236 aaKnown RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 HCN3Q9P1Z3 774 aa11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
SNRNP48-201ENST00000342415 TRBV2A0A0J9YWF9 115 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 RAD1O60671 282 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 MMP11P24347 488 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 UGT2B10P36537 528 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 CRYZQ08257 329 aaKnown RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 FTMTQ8N4E7 242 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 UBTD2Q8WUN7 234 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ADAD1Q96M93 576 aaKnown RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 MYNNQ9NPC7 610 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 AKAP7Q9P0M2 348 aaPredicted RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 STOML2Q9UJZ1 356 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 CENPBD1B2RD01 187 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 F11P03951 625 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 LCN1P31025 176 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ETV5P41161 510 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 HTR3AP46098 478 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ETV1P50549 477 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 MLLT11Q13015 90 aaPredicted RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 UNC5DQ6UXZ4 953 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ZNF627Q7L945 461 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 OR52E2Q8NGJ4 325 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 SMAP2Q8WU79 429 aaPredicted RBP11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 CHTF18Q8WVB6 975 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 HSPA12BQ96MM6 686 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 GVINP1Q7Z2Y8 2422 aa11.71□□□□□ -0.53
SNRNP48-201ENST00000342415 EMC8O43402 210 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms