RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ATG12O94817 140 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 CELP19835 753 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 SLC1A3P43003 542 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 PGBD2Q6P3X8 592 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 WDR53Q7Z5U6 358 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-201ENST00000342245 ZBTB2Q8N680 514 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 TTC16Q8NEE8 873 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 GLYATL2Q8WU03 294 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 RGMAQ96B86 450 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 TCEAL7Q9BRU2 100 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 NLGN3Q9NZ94 848 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 RHCGQ9UBD6 479 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 CTDSPLO15194 276 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 LRRTM2O43300 516 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 H1F0P07305 194 aaKnown RBP17.46■□□□□ 0.39
SMPD1-201ENST00000342245 DGKEP52429 567 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 PSMA6P60900 246 aaKnown RBP17.46■□□□□ 0.39
SMPD1-201ENST00000342245 MPPE1Q53F39 396 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 ELFN2Q5R3F8 820 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 SPAG16Q8N0X2 631 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 FBXO15Q8NCQ5 510 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-201ENST00000342245 MRPL48Q96GC5 212 aaKnown RBP17.46■□□□□ 0.39
SMPD1-201ENST00000342245 C1GALT1Q9NS00 363 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 VPS29Q9UBQ0 182 aa17.46■□□□□ 0.39
SMPD1-201ENST00000342245 PMS2P1A4D2B8 440 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 CD8B2A6NJW9 211 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 HTR3BO95264 441 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 SERPINA3P01011 423 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 IGFBP1P08833 259 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 CD8BP10966 210 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ZXDBP98169 803 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 KLF9Q13886 244 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 GINS1Q14691 196 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 MS4A13Q5J8X5 152 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 SPOUT1Q5T280 376 aaKnown RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 MEIOBQ8N635 442 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ZFP41Q8N8Y5 198 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 BHLHE41Q9C0J9 482 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ARL6Q9H0F7 186 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 TEX10Q9NXF1 929 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 PTGFRNQ9P2B2 879 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 A0A1W2PRB8 838 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 SNRPGP15A8MWD9 76 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ARAFP10398 606 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 THBS2P35442 1172 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 GIPRP48546 466 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 VEGFCP49767 419 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 RNF144AP50876 292 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 GMFBP60983 142 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 CDK5Q00535 292 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 KRT33BQ14525 404 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ELP2Q6IA86 826 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 OR6K3Q8NGY3 331 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 PDFQ9HBH1 243 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF334Q9HCZ1 680 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-201ENST00000342245 TAS2R3Q9NYW6 316 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
SMPD1-201ENST00000342245 C2orf92A0A1B0GVN3 265 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 OR6C75A6NL08 312 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 FFAR1O14842 300 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 NDUFS6O75380 124 aaKnown RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 CD3GP09693 182 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 CBSLP0DN79 551 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 PSMB1P20618 241 aaKnown RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 CBSP35520 551 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 PREPP48147 710 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 BCL2L1Q07817 233 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 ACSM2AQ08AH3 577 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 COX20Q5RI15 118 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 ACSM2BQ68CK6 577 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 GPC2Q8N158 579 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 RFKQ969G6 155 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 SLC35A5Q9BS91 424 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 PRDM9Q9NQV7 894 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 DRGXA6NNA5 263 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 FAM227AF5H4B4 570 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 INSIG1O15503 277 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 STAT5AP42229 794 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 AVPI1Q5T686 147 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 VASNQ6EMK4 673 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 DHRS7BQ6IAN0 325 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 GLDNQ6ZMI3 551 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 Q6ZTK2 550 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 SKA3Q8IX90 412 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 POGLUT1Q8NBL1 392 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 BPIFCQ8NFQ6 507 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 TRMT10AQ8TBZ6 339 aaKnown RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 BBS4Q96RK4 519 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 PKP4Q99569 1192 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 GPATCH2Q9NW75 528 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 MRTO4Q9UKD2 239 aaKnown RBP17.44■□□□□ 0.38
SMPD1-201ENST00000342245 FBXL3Q9UKT7 428 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 ACSL6Q9UKU0 697 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 MKL2Q9ULH7 1088 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 SCN8AQ9UQD0 1980 aa17.44■□□□□ 0.38
SMPD1-201ENST00000342245 CREBL2O60519 120 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 SLC25A14O95258 325 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 MT-ND4P03905 459 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms