RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 SH3GL2Q99962 352 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 HINT2Q9BX68 163 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 CD244Q9BZW8 370 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 B3GAT1Q9P2W7 334 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 LEF1Q9UJU2 399 aaPredicted RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SNED1Q8TER0 1413 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 hCG_1818297A0A087WSY0 165 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 C9JVG2 144 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 M0R2N6 131 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SLC22A3O75751 556 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 METTL18O95568 372 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 AHSGP02765 367 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 NELFEP18615 380 aaKnown RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 TTKP33981 857 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 DRD3P35462 400 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 CDC42P60953 191 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 DUSP2Q05923 314 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 MFAP5Q13361 173 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 FIGNQ5HY92 759 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 LRRC15Q8TF66 581 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF775Q96BV0 537 aaPredicted RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 BCO1Q9HAY6 547 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 FBXO8Q9NRD0 319 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 TARM1B6A8C7 271 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 TULP2O00295 520 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 IDH3BO43837 385 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 IFNA6P05013 189 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SBK2P0C263 348 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 THRAP10827 490 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SRP9P49458 86 aaKnown RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 NAGLUP54802 743 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 C1orf146Q5VVC0 180 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 KCTD16Q68DU8 428 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 OR5M10Q6IEU7 315 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 PLEKHA7Q6IQ23 1121 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 DPY19L2P1Q6NXN4 242 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 LAPTM4BQ86VI4 370 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 D2HGDHQ8N465 521 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SLC46A1Q96NT5 459 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 SLCO1C1Q9NYB5 712 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 LAMP3Q9UQV4 416 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 OR51B4Q9Y5P0 310 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 STYXL1Q9Y6J8 313 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 TMEM202A6NGA9 273 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 BEST1O76090 585 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 OPN1LWP04000 364 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 PPP3CBP16298 524 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 TCN1P20061 433 aaPredicted RBP7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF92Q03936 586 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF750Q32MQ0 723 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 PYCR3Q53H96 274 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 MTX3Q5HYI7 312 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF793Q6ZN11 406 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 KLBQ86Z14 1044 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 NUP43Q8NFH3 380 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 OR52B6Q8NGF0 335 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 FKBP10Q96AY3 582 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 Q96MT0 163 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 CAB39LQ9H9S4 337 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ADAM30Q9UKF2 790 aa7.88□□□□□ -1.15
HMGB1-203ENST00000341423 ZFHX2Q9C0A1 2572 aaPredicted RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 TRBC2A0A5B9 178 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 SSX4O60224 188 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 VNN1O95497 513 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 EDN3P14138 238 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 BRS3P32247 399 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 KLK7P49862 253 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 MC2RQ01718 297 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 DLG1Q12959 904 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 CLN3Q13286 438 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 CNTN4Q8IWV2 1026 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 SPICQ8N5J4 248 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 CDRT4Q8N9R6 151 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 LSM14AQ8ND56 463 aaKnown RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 F2RL3Q96RI0 385 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 MLXIPLQ9NP71 852 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 MBNL1Q9NR56 388 aaKnown RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 GLRX2Q9NS18 164 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 TBC1D23Q9NUY8 699 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 TNRC6CQ9HCJ0 1690 aaKnown RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 PDLIM1O00151 329 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 SERPINE1P05121 402 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 H2BFMP0C1H6 154 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 EIF2B2P49770 351 aaKnown RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 BIDP55957 195 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 CCNI2Q6ZMN8 369 aaPredicted RBP7.87□□□□□ -1.15
HMGB1-203ENST00000341423 FAM217AQ8IXS0 508 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF321PQ8N8H1 164 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 PATE1Q8WXA2 126 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 KREMEN1Q96MU8 473 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 VIPAS39Q9H9C1 493 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 GPR179Q6PRD1 2367 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 PROB1E7EW31 1015 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 FBP2O00757 339 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 FMO6PO60774 539 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 CBR3O75828 277 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 RCBTB2O95199 551 aa7.87□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF83P51522 516 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms