RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 HTR4Q13639 388 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 GINS1Q14691 196 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 MFSD4BQ5TF39 518 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 AGAP6Q5VW22 663 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 KIAA1324Q6UXG2 1013 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 TMEM92Q6UXU6 159 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 MTSS1LQ765P7 747 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 OR4N5Q8IXE1 308 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 NT5CQ8TCD5 201 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 SLC35A4Q96G79 324 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 AGAP4Q96P64 663 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 TRNT1Q96Q11 434 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 OR2A5Q96R48 311 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 TSSK6Q9BXA6 273 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 FBRSQ9HAH7 460 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 C3orf14Q9HBI5 128 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 NEK6Q9HC98 313 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 MOV10Q9HCE1 1003 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 SMURF1Q9HCE7 757 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 NCKAP1Q9Y2A7 1128 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 H3BQ06 376 aaPredicted RBP18.83■□□□□ 0.61
SPG7-202ENST00000341316 TLX2O43763 284 aaPredicted RBP18.83■□□□□ 0.61
SPG7-202ENST00000341316 NDUFS1P28331 727 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 TNFSF8P32971 234 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 GIPRP48546 466 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 COPZ1P61923 177 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 TGM3Q08188 693 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 RUNX2Q13950 521 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 DEFB134Q4QY38 66 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 PAQR6Q6TCH4 344 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 SLC16A11Q8NCK7 471 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 COL26A1Q96A83 441 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 TM4SF19Q96DZ7 209 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 CCDC32Q9BV29 185 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 TP63Q9H3D4 680 aaPredicted RBP18.83■□□□□ 0.61
SPG7-202ENST00000341316 EGLN3Q9H6Z9 239 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 HHATLQ9HCP6 504 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 TBC1D24Q9ULP9 559 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 NTNG1Q9Y2I2 539 aa18.83■□□□□ 0.61
SPG7-202ENST00000341316 CSO75390 466 aaKnown RBP18.83■□□□□ 0.6
SPG7-202ENST00000341316 NDUFV2P19404 249 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 CSTF2P33240 577 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPG7-202ENST00000341316 TRHRP34981 398 aaPredicted RBP18.83■□□□□ 0.6
SPG7-202ENST00000341316 SOX3P41225 446 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 PDX1P52945 283 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 RGS1Q08116 209 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 COX10Q12887 443 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 PRAMEF8Q5VWM4 474 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 PRAMEF7Q5VXH5 474 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 FCRL6Q6DN72 434 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 USP30Q70CQ3 517 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 UTS2BQ765I0 119 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 SLC34A3Q8N130 599 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 OR8H2Q8N162 312 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 FGF11Q92914 225 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 TMEM80Q96HE8 168 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 ARHGDIGQ99819 225 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 ASPNQ9BXN1 380 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 SEMA4GQ9NTN9 838 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 CRNNQ9UBG3 495 aaPredicted RBP18.83■□□□□ 0.6
SPG7-202ENST00000341316 SCML1Q9UN30 329 aa18.83■□□□□ 0.6
SPG7-202ENST00000341316 A0A075B6Q4 140 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 CPSF4LA6NMK7 179 aaKnown RBP18.82■□□□□ 0.6
SPG7-202ENST00000341316 SMIM10L1P0DMW3 83 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 UGT2B7P16662 529 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 POLR2CP19387 275 aaPredicted RBP18.82■□□□□ 0.6
SPG7-202ENST00000341316 SOX18P35713 384 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 OR2B6P58173 313 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 SIM1P81133 766 aaPredicted RBP18.82■□□□□ 0.6
SPG7-202ENST00000341316 EFNB1P98172 346 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 CDK5Q00535 292 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 OCLNQ16625 522 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 ENTPD8Q5MY95 495 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 MEDAGQ5VYS4 303 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 PRICKLE2Q7Z3G6 844 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 SFTPA2Q8IWL1 248 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 OR10G6Q8NH81 332 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 PATE1Q8WXA2 126 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 SMIM10Q96HG1 83 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 ACTRT3Q9BYD9 372 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 MSRAQ9UJ68 235 aa18.82■□□□□ 0.6
SPG7-202ENST00000341316 LOC105369274A0A096LPK9 316 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 LOC102723532A0A0G2JNH3 316 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 ALPPP05187 535 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 ACADMP11310 421 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 RPS19P39019 145 aaKnown RBP18.81■□□□□ 0.6
SPG7-202ENST00000341316 TAS2R41P59536 307 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 TNFRSF17Q02223 184 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 NCF4Q15080 339 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 ALG11Q2TAA5 492 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 C16orf62Q7Z3J2 963 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 TMEFF1Q8IYR6 380 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 OR4N4Q8N0Y3 316 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 DOK4Q8TEW6 326 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 POLDIP3Q9BY77 421 aaKnown RBP18.81■□□□□ 0.6
SPG7-202ENST00000341316 BARHL1Q9BZE3 327 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 TWSG1Q9GZX9 223 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 RPL36Q9Y3U8 105 aaKnown RBP18.81■□□□□ 0.6
SPG7-202ENST00000341316 SYT5O00445 386 aa18.81■□□□□ 0.6
SPG7-202ENST00000341316 CYP7B1O75881 506 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms