RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MFSD12Q6NUT3 480 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SLC22A16Q86VW1 577 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 CDRT4Q8N9R6 151 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SLC16A11Q8NCK7 471 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 VPS37AQ8NEZ2 397 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OR52N2Q8NGI0 321 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OR4A15Q8NGL6 344 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OR5AK3PQ8NH89 298 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 GPR151Q8TDV0 419 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PIK3R3Q92569 461 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 JSRP1Q96MG2 331 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 RILPQ96NA2 401 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ANGPTL4Q9BY76 406 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 METTL7AQ9H8H3 244 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 IL1RL2Q9HB29 575 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SDR39U1Q9NRG7 319 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 BAHCC1Q9P281 2608 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 TTC36A6NLP5 189 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ACOT7O00154 380 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ABCB7O75027 752 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SLC22A3O75751 556 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 NKX2-2O95096 273 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 CPSF4O95639 269 aaKnown RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 HMGN2P05204 90 aaKnown RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PGRP06401 933 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ACP2P11117 423 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SOAT1P35610 550 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PRIM2P49643 509 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PNLIPRP2P54317 469 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 LASP1Q14847 261 aaKnown RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 DECR1Q16698 335 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 VPS26BQ4G0F5 336 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ZCCHC12Q6PEW1 402 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 CLEC4FQ8N1N0 589 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 GLB1L3Q8NCI6 653 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OR56A1Q8NGH5 318 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 RFWD2Q8NHY2 731 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SFXN5Q8TD22 340 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 JADE3Q92613 823 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 MOAP1Q96BY2 351 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OTUB1Q96FW1 271 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 OR52E6Q96RD3 313 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ZBTB18Q99592 522 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 CCDC28BQ9BUN5 200 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 DEFB127Q9H1M4 99 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 NPHS2Q9NP85 383 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 FAM120CQ9NX05 1096 aaKnown RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 DCTN4Q9UJW0 460 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 BOKQ9UMX3 212 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PCDHGB4Q9UN71 923 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 MYO7BQ6PIF6 2116 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 LRRC3CA6NJW4 275 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 ZNHIT1O43257 154 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 TRIM3O75382 744 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 SNX4O95219 450 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 IL33O95760 270 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 ALOX5P09917 674 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 RFPL3SP0C7P2 107 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 PTGDSP41222 190 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 MAGEA5P43359 124 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 RFX3P48380 749 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 MRPS22P82650 360 aaKnown RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 HSF1Q00613 529 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 EFR3AQ14156 821 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 DUSP5Q16690 384 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 HYAL4Q2M3T9 481 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 CMPK2Q5EBM0 449 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 EXOSC6Q5RKV6 272 aaKnown RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 TMEM81Q6P7N7 255 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 PAOXQ6QHF9 649 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 PACS2Q86VP3 889 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 MIER2Q8N344 545 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 TMEM251Q8N6I4 163 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 OR9I1Q8NGQ6 314 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 NTNG2Q96CW9 530 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 ZNF597Q96LX8 424 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 OSBPL11Q9BXB4 747 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 ACTRT3Q9BYD9 372 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 ZFP64Q9NPA5 681 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 GPATCH2Q9NW75 528 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 KLRF1Q9NZS2 232 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 MRTO4Q9UKD2 239 aaKnown RBP13.97□□□□□ -0.17
UBE3B-201ENST00000340074 OSGIN2Q9Y236 505 aa13.97□□□□□ -0.17
UBE3B-201ENST00000340074 C2orf72A6NCS6 295 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 PRAMEF25A6NGN4 478 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 ICOSLGO75144 302 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 PDE9AO76083 593 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 KCNH1O95259 989 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 IGKV1D-16P01601 117 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 CYP4B1P13584 511 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 ZFP36L2P47974 494 aaKnown RBP13.96□□□□□ -0.18
UBE3B-201ENST00000340074 MASP1P48740 699 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 SNTA1Q13424 505 aa13.96□□□□□ -0.18
UBE3B-201ENST00000340074 FNDC7Q5VTL7 733 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms