RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TESK1Q15569 626 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 GRIK5Q16478 980 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 LIPJQ5W064 366 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ZNF783Q6ZMS7 281 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CPNE8Q86YQ8 564 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 TEX26Q8N6G2 289 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ZUFSPQ96AP4 578 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 ASB4Q9Y574 426 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CYB5BO43169 146 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 XRCC3O43542 346 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 NDUFV2P19404 249 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ETV1P50549 477 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 LCLAT1Q6UWP7 414 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SORCS2Q96PQ0 1159 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ELF4Q99607 663 aaPredicted RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 NIPSNAP3BQ9BS92 247 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SERTAD3Q9UJW9 196 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 OR6C75A6NL08 312 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 A8MT66 165 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 HLA-AP01891 365 aaKnown RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 GABRR1P24046 479 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SOX9P48436 509 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CLCNKBP51801 687 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 RABGGTBP53611 331 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 RELAQ04206 551 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 GPM6BQ13491 265 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 FAM84AQ96KN4 292 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 INTS14Q96SY0 518 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ZDHHC3Q9NYG2 299 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 LOC102723532A0A0G2JNH3 316 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SH2D7A6NKC9 451 aaPredicted RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 SLC22A31A6NKX4 558 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SOBPA7XYQ1 873 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SCO2O43819 266 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CST3P01034 146 aaPredicted RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 SGSHP51688 502 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 OR10K2Q6IF99 312 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 EPGNQ6UW88 154 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 LRRTM4Q86VH4 590 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 NDNFQ8TB73 568 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 KLHL42Q9P2K6 505 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 AGAP14A8MT82 685 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 TGOLN2O43493 480 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SYT7O43581 403 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 GIFP27352 417 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 GDI1P31150 447 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 OTX2P32243 289 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 HSF1Q00613 529 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CRYZQ08257 329 aaKnown RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 DNAJC22Q8N4W6 341 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 HORMAD2Q8N7B1 307 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 IL17RDQ8NFM7 739 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SGK3Q96BR1 496 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 FOXRED1Q96CU9 486 aaPredicted RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 PCED1BQ96HM7 432 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CPNE5Q9HCH3 593 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 FBRSL1Q9HCM7 1045 aaKnown RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 TRPM1Q7Z4N2 1603 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 HPGDSO60760 199 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 HTR7P34969 479 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 CAP1Q01518 475 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ZNF763Q0D2J5 394 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 TMEM173Q86WV6 379 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 USP36Q9P275 1121 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 MSTNO14793 375 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SCGB1C2P0DMR2 95 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 KCNC1P48547 511 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 NKX3-2P78367 333 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 POU6F2P78424 691 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 SLC22A6Q4U2R8 563 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 AVPI1Q5T686 147 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ALKAL2Q6UX46 152 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 OR4K14Q8NGD5 310 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 G6PC3Q9BUM1 346 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 C19orf25Q9UFG5 118 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 TDRD6O60522 2096 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 FTCDNL1E5RQL4 147 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 DNAJB5O75953 348 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 EPOP01588 193 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 CRYBA1P05813 215 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 LPLP06858 475 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 BMP4P12644 408 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ATP1B2P14415 290 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 SQSTM1Q13501 440 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 COL9A2Q14055 689 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 LRRC55Q6ZSA7 311 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms