RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SERPINE2P07093 398 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 BTF3P20290 206 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RAB3AP20336 220 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 BGNP21810 368 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CYP2F1P24903 491 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC12A3P55017 1021 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RRAS2P62070 204 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GLO1Q04760 184 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SERINC3Q13530 473 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AARDQ4LEZ3 155 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CBWD6Q4V339 395 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FAM109BQ6ICB4 259 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 REEP3Q6NUK4 255 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM205Q6UW68 189 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 C1orf174Q8IYL3 243 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TRAM1L1Q8N609 369 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR2L2Q8NH16 312 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CD200R1Q8TD46 325 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RRNAD1Q96FB5 475 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IGSF21Q96ID5 467 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF354BQ96LW1 612 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TSNAXQ99598 290 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ELF4Q99607 663 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM246Q9BRR3 403 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ASB8Q9H765 288 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ISYNA1Q9NPH2 558 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TM7SF3Q9NS93 570 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ABRACLQ9P1F3 81 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC23A1Q9UHI7 598 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FZD4Q9ULV1 537 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CPQQ9Y646 472 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LOC100506127A0A0U1RQW1 187 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF726A6NNF4 738 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HOXC11O43248 304 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZMPSTE24O75844 475 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RBBP9O75884 186 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CPNE6O95741 557 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC16A8O95907 504 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CCNB1P14635 433 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TFE3P19532 575 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC6A8P48029 635 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF41P51814 821 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CDH12P55289 794 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GTF2BQ00403 316 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 REEP5Q00765 189 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RING1Q06587 406 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TAF10Q12962 218 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PDE7AQ13946 482 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UBAP2LQ14157 1087 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GRIN2CQ14957 1233 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LRRC73Q5JTD7 316 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 N4BP2L1Q5TBK1 243 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF8Q5VWM4 474 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF7Q5VXH5 474 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF470Q6ECI4 717 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DPY19L3Q6ZPD9 716 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PXKQ7Z7A4 578 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRSS58Q8IYP2 241 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GSTCDQ8NEC7 633 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR56B4Q8NH76 319 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UBA3Q8TBC4 463 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZFAND1Q8TCF1 268 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC2A12Q8TD20 617 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NUS1Q96E22 293 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 L3HYPDHQ96EM0 354 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 JMJD8Q96S16 334 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TBL1XR1Q9BZK7 514 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF436Q9C0F3 470 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 S100A14Q9HCY8 104 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CISHQ9NSE2 258 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R3Q9NYW6 316 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LRFN1Q9P244 771 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 KLK4Q9Y5K2 254 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SCN10AQ9Y5Y9 1956 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ST8SIA5O15466 376 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DENRO43583 198 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 B4GALT2O60909 372 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RNGTTO60942 597 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RHOQP17081 205 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GDI2P50395 445 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PCBD1P61457 104 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 POU6F2P78424 691 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IL10RAQ13651 578 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ARHGAP19Q14CB8 494 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 P2RY14Q15391 338 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FAM26DQ5JW98 314 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF17Q5VTA0 474 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TIFABQ6ZNK6 161 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TMUB2Q71RG4 321 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SCML4Q8N228 414 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC7A6Q92536 515 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GTF2H4Q92759 462 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PCDHB18PQ96TA0 734 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DEFB126Q9BYW3 111 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RSPH9Q9H1X1 276 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 BOKQ9UMX3 212 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NUMBLQ9Y6R0 609 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 V9GYS6 101 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MN1Q10571 1320 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GREB1Q4ZG55 1949 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms