RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 LRRC28Q86X40 367 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-201ENST00000339486 RASGEF1AQ8N9B8 481 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 OR10G6Q8NH81 332 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 IGSF21Q96ID5 467 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 DPH7Q9BTV6 452 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 SLC35C2Q9NQQ7 365 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 ZSCAN32Q9NX65 697 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 B3GNT2Q9NY97 397 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 COPZ2Q9P299 210 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
RIOK3-201ENST00000339486 NUBP2Q9Y5Y2 271 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 UBXN7O94888 489 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 PLATP00750 562 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 MT-ND4P03905 459 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 MINDY4Q4G0A6 757 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 ZNF782Q6ZMW2 699 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-201ENST00000339486 NUP43Q8NFH3 380 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 PRRC1Q96M27 445 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 CWH43Q9H720 699 aa11.76□□□□□ -0.53
RIOK3-201ENST00000339486 FBXO9Q9UK97 447 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-201ENST00000339486 A0A1B0GVI7 797 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 SHC1P29353 583 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 BIKQ13323 160 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 PIP5KL1Q5T9C9 394 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 GPALPP1Q8IXQ4 340 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 NLGN4YQ8NFZ3 816 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 ZSWIM3Q96MP5 696 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 AK6Q9Y3D8 172 aaKnown RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 A8MUA0 341 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 PDCD5O14737 125 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 RP2O75695 350 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 TFP02787 698 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 SOX2P48431 317 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 FBXW4P57775 412 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 TAS2R38P59533 333 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 BTN3A2P78410 334 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 ZNF805Q5CZA5 627 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 TOR1AIP1Q5JTV8 583 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 FCRLBQ6BAA4 426 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 SLC9B2Q86UD5 537 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 NLRP8Q86W28 1048 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 OR6T1Q8NGN1 323 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 OR5AR1Q8NGP9 310 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 OTUB2Q96DC9 234 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 S100A16Q96FQ6 103 aaKnown RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 FZD6O60353 706 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 HBQ1P09105 142 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 ID2Q02363 134 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 GPR176Q14439 515 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 HSD17B12Q53GQ0 312 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 CCDC157Q569K6 752 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 MLIPQ5VWP3 458 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 CCDC36Q8IYA8 594 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 OR5W2Q8NH69 310 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 METTL17Q9H7H0 456 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 BABAM2Q9NXR7 383 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-201ENST00000339486 DEC1Q9P2X7 70 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 NUP50Q9UKX7 468 aa11.75□□□□□ -0.53
RIOK3-201ENST00000339486 COL11A1P12107 1806 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-201ENST00000339486 POM121CA8CG34 1229 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 GFYI3L273 518 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 C1orf105O95561 183 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 NUDT14O95848 222 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 F11P03951 625 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 PRKACAP17612 351 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 CRYBB2P43320 205 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 KCNJ5P48544 419 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 GZMMP51124 257 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 OR12D2P58182 307 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 FABP5Q01469 135 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 SLC22A10Q63ZE4 541 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 ARMC6Q6NXE6 501 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 WDR53Q7Z5U6 358 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-201ENST00000339486 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-201ENST00000339486 LRRTM4Q86VH4 590 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 KCT2Q8NC54 265 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 SETD7Q8WTS6 366 aaKnown RBP11.74□□□□□ -0.53
RIOK3-201ENST00000339486 HMGB4Q8WW32 186 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 MACROD1Q9BQ69 325 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-201ENST00000339486 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 ARPC5O15511 151 aa11.74□□□□□ -0.53
RIOK3-201ENST00000339486 SCO2O43819 266 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms