RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CEP19Q96LK0 163 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 BARHL1Q9BZE3 327 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 SP140LQ9H930 580 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 SNTG1Q9NSN8 517 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 C14orf119Q9NWQ9 140 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 CNIH4Q9P003 139 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 NTNG1Q9Y2I2 539 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 MUC3AQ02505 3323 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 A0A087WUU8 490 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 IGHV1OR15-9A0A0B4J2B8 117 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 A0A0G2JPF8 293 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 HNRNPCL2B2RXH8 293 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 C10orf142B7Z368 130 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 HNRNPCL3B7ZW38 293 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 BTN3A3O00478 584 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 KCNK2O95069 426 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 HNRNPCL4P0DMR1 293 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 PTNP21246 168 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
LITAF-201ENST00000339430 AKT2P31751 481 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 AVPR1BP47901 424 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 TJAP1Q5JTD0 557 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 C1orf94Q6P1W5 598 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 PRICKLE2Q7Z3G6 844 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 TRIM73Q86UV7 250 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 SFXN5Q8TD22 340 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 TMEM203Q969S6 136 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 COL26A1Q96A83 441 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 ZNF582Q96NG8 517 aaPredicted RBP15.28■□□□□ 0.04
LITAF-201ENST00000339430 POLDIP3Q9BY77 421 aaKnown RBP15.28■□□□□ 0.04
LITAF-201ENST00000339430 PROM1O43490 865 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 GUCY1B2O75343 617 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 CYP7B1O75881 506 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 PSMA1P25786 263 aaKnown RBP15.27■□□□□ 0.04
LITAF-201ENST00000339430 CMPK1P30085 196 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 MPIP34949 423 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 AHRP35869 848 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 ETV5P41161 510 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 CRYBB2P43320 205 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 ETV1P50549 477 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 ANXA11P50995 505 aaKnown RBP15.27■□□□□ 0.04
LITAF-201ENST00000339430 CCR5P51681 352 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 PRR5P85299 388 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 ALDH6A1Q02252 535 aaKnown RBP15.27■□□□□ 0.04
LITAF-201ENST00000339430 COX10Q12887 443 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 CLEC12AQ5QGZ9 265 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 SHFQ7M4L6 423 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 OR56A1Q8NGH5 318 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 ELP4Q96EB1 424 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 PINK1Q9BXM7 581 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 SLC38A1Q9H2H9 487 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 TBC1D29Q9UFV1 150 aa15.27■□□□□ 0.04
LITAF-201ENST00000339430 PAIP2BQ9ULR5 123 aaKnown RBP15.27■□□□□ 0.04
LITAF-201ENST00000339430 LRRTM2O43300 516 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 EMC8O43402 210 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 PDGFBP01127 241 aaPredicted RBP15.27■□□□□ 0.03
LITAF-201ENST00000339430 ABATP80404 500 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 ZXDAP98168 799 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 CDC20Q12834 499 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 C6orf132Q5T0Z8 1188 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 ENPP7Q6UWV6 458 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 CCDC190Q86UF4 302 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 FAM26EQ8N5C1 309 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 DEFB119Q8N690 84 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 SLC9A6Q92581 669 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 FAM46AQ96IP4 442 aaKnown RBP15.27■□□□□ 0.03
LITAF-201ENST00000339430 SMURF1Q9HCE7 757 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 CPNE5Q9HCH3 593 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 SEMA4GQ9NTN9 838 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 SLC13A4Q9UKG4 626 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 UGT2A1Q9Y4X1 527 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 ZNF780BQ9Y6R6 833 aa15.27■□□□□ 0.03
LITAF-201ENST00000339430 PRR19A6NJB7 356 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 LOC110117498-PIK3R3F6TDL0 507 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 FCMRO60667 390 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 RAB36O95755 333 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 ALPPP05187 535 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 TNFSF8P32971 234 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 TRHRP34981 398 aaPredicted RBP15.26■□□□□ 0.03
LITAF-201ENST00000339430 CXCL12P48061 93 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 TPTEP56180 551 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 KIAA1024LP59773 190 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 CDK5Q00535 292 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 C1DQ13901 141 aaKnown RBP15.26■□□□□ 0.03
LITAF-201ENST00000339430 GNA13Q14344 377 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 NFATC4Q14934 902 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 DESI1Q6ICB0 168 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 C16orf62Q7Z3J2 963 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 MFSD9Q8NBP5 474 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 SIMC1Q8NDZ2 872 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 PROKR2Q8NFJ6 384 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 OR8D4Q8NGM9 314 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 DOK4Q8TEW6 326 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 LCN9Q8WX39 176 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 ITPKCQ96DU7 683 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 SDHCQ99643 169 aaPredicted RBP15.26■□□□□ 0.03
LITAF-201ENST00000339430 RMI1Q9H9A7 625 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 GIMAP4Q9NUV9 329 aa15.26■□□□□ 0.03
LITAF-201ENST00000339430 ANKMY1Q9P2S6 941 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms