RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
PCDH8-201ENST00000338862 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 PSME4Q14997 1843 aa13.32□□□□□ -0.28
PCDH8-201ENST00000338862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 OR52A4PA6NMU1 304 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TGM5O43548 720 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SOX30O94993 753 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 LALBAP00709 142 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SOD2P04179 222 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 RPL4P36578 427 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 MC3RP41968 323 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SLC1A3P43003 542 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SLC25A25Q6KCM7 469 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 LIPIQ6XZB0 460 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 CXXC5Q7LFL8 322 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TRAM1L1Q8N609 369 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 IRF7Q92985 503 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 OR10A4Q9H209 315 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 NDUFB11Q9NX14 153 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 HMGN4O00479 90 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 PRODHO43272 600 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 PROM1O43490 865 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 CCR8P51685 355 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 MVDP53602 400 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 HCCSP53701 268 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 PLK5Q496M5 336 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 RASSF6Q6ZTQ3 369 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 CDK20Q8IZL9 346 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 RGMAQ96B86 450 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 RBCK1Q9BYM8 510 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 B3GAT2Q9NPZ5 323 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 USP36Q9P275 1121 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 AK6Q9Y3D8 172 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 A0A087WUU8 490 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 ABHD14A-ACY1A0A1B0GW23 586 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TMPRSS11DO60235 418 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 SLCO2B1O94956 709 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 PAK4O96013 591 aaPredicted RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 IGHA2P01877 340 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 GABRB1P18505 474 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 DDCP20711 480 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TRIM23P36406 574 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 GZMKP49863 264 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 CCR4P51679 360 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 CLDN12P56749 244 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 KCNC3Q14003 757 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 TRIM71Q2Q1W2 868 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 METTL2BQ6P1Q9 378 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
PCDH8-201ENST00000338862 MEIOBQ8N635 442 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 OR4M1Q8NGD0 313 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 C12orf4Q9NQ89 552 aa13.31□□□□□ -0.28
PCDH8-201ENST00000338862 IQCMA0A1B0GVH7 501 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CHST10O43529 356 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 UGDHO60701 494 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 KDM4BO94953 1096 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 MSL3P1P0C860 447 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 SNRPBP14678 240 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 POU3F3P20264 500 aaPredicted RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 TSPAN5P62079 268 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 LTB4RQ15722 352 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 GDPGP1Q6ZNW5 385 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 BOLLQ8N9W6 283 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 OR9A2Q8NGT5 310 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 COQ8AQ8NI60 647 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 RAD9AQ99638 391 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF780BQ9Y6R6 833 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 PLXNB2O15031 1838 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 LAMP2P13473 410 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ETV6P41212 452 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 RPS5P46782 204 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 BTN3A2P78410 334 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CAP1Q01518 475 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ASAH1Q13510 395 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ADAMTS19Q8TE59 1207 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 PMEPA1Q969W9 287 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF689Q96CS4 500 aaPredicted RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
PCDH8-201ENST00000338862 A0A0B4J293 547 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 LRRC72A6NJI9 287 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CA12O43570 354 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF30P17039 623 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 PTPN2P17706 415 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 NNATQ16517 81 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 CDKN3Q16667 212 aa13.3□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF805Q5CZA5 627 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms