RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SAC3D1A6NKF1 404 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C9orf172C9J069 976 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DIRAS1O95057 198 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FESP07332 822 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KCNJ5P48544 419 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NNATQ16517 81 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TYW3Q6IPR3 259 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR4N2Q8NGD1 307 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 RASSF5Q8WWW0 418 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 EME1Q96AY2 570 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 RMND5BQ96G75 393 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ART5Q96L15 291 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CIB1Q99828 191 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BDH2Q9BUT1 245 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SPATA5L1Q9BVQ7 753 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NUDT9Q9BW91 350 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DNAJB9Q9UBS3 223 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BAG5Q9UL15 447 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AK5Q9Y6K8 562 aa13.69□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PRAMEF25A6NGN4 478 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GNGT2O14610 69 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 STX11O75558 287 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SOX30O94993 753 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AK1P00568 194 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CAPNS1P04632 268 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ALPPP05187 535 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CT45A8P0DMV1 189 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CT45A9P0DMV2 189 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NCF4Q15080 339 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GPR68Q15743 365 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CT45A2Q5DJT8 189 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C6orf15Q6UXA7 325 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AMER2Q8N7J2 671 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GEMIN6Q8WXD5 167 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SLC46A1Q96NT5 459 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF350Q9GZX5 532 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VCX3BQ9H321 246 aa13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NXT1Q9UKK6 140 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KCNK2O95069 426 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 RFX3P48380 749 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PUM1Q14671 1186 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■□□□□ 11.1
CDK5RAP3-201ENST00000338399 IQCCQ4KMZ1 466 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TMEM164Q5U3C3 297 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TIPARPQ7Z3E1 657 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TSEN54Q7Z6J9 526 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MORN4Q8NDC4 146 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR1N1Q8NGS0 311 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PROX1Q92786 737 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 Q9N2J8 555 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FOXJ2Q9P0K8 574 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 COPS7AQ9UBW8 275 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PADI1Q9ULC6 663 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PADI2Q9Y2J8 665 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PCDHGA3Q9Y5H0 932 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TTC36A6NLP5 189 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PEX1O43933 1283 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BRINP1O60477 761 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PRSS23O95084 383 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DLGAP3O95886 979 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CCNYL3P0C7X3 344 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CSRP1P21291 193 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TRHRP34981 398 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IST1P53990 364 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PPP1R8Q12972 351 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 COMTD1Q86VU5 262 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MARCH9Q86YJ5 346 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 EPHX4Q8IUS5 362 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GALNT4Q8N4A0 578 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C8orf44Q96CB5 159 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SPRY4Q9C004 299 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CFL2Q9Y281 166 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZFHX2Q9C0A1 2572 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms