RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 A0A1W2PRQ8 180 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 M0R082 166 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ARL6IP5O75915 188 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ATG12O94817 140 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ICAM2P13598 275 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ITGA3P26006 1051 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 S100A2P29034 98 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 IL12BP29460 328 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 RPS26P62854 115 aaKnown RBP15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ID2Q02363 134 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 HYAL2Q12891 473 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF425Q6IV72 752 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 GLRX5Q86SX6 157 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 NLGN4YQ8NFZ3 816 aaPredicted RBP15.24■□□□□ 0.03
NPHP3-201ENST00000337331 TMEM185BQ9H7F4 350 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 IL17CQ9P0M4 197 aa15.24■□□□□ 0.03
NPHP3-201ENST00000337331 RHPN2P1A8MT19 583 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 UBXN7O94888 489 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 NUDT7P0C024 238 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 CRISP1P54107 249 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 TRAM2Q15035 370 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 PON3Q15166 354 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 LRRC37A5PQ49AS3 106 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 C4orf46Q504U0 113 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF805Q5CZA5 627 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 RAB11FIP2Q7L804 512 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 LNX2Q8N448 690 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 OR51G2Q8NGK0 314 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 BHLHE41Q9C0J9 482 aaPredicted RBP15.23■□□□□ 0.03
NPHP3-201ENST00000337331 PLEKHA1Q9HB21 404 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 LOC285095A0A1B0GVY8 99 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 TMEM150CB9EJG8 249 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 PRODHO43272 600 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 OR12D1P0DN82 309 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 LAMP1P11279 417 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 LDLRAD1Q5T700 205 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 TMEM65Q6PI78 240 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 OR5T2Q8NGG2 359 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 OR52P1PQ8NH57 321 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 CD200R1Q8TD46 325 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 CPNE2Q96FN4 548 aaPredicted RBP15.23■□□□□ 0.03
NPHP3-201ENST00000337331 C14orf105Q9NVL8 296 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 ELOVL2Q9NXB9 296 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 PCDHGA6Q9Y5G7 932 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 A0A0G2JMP0 313 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 FARS2O95363 451 aaKnown RBP15.23■□□□□ 0.03
NPHP3-201ENST00000337331 HSD3B1P14060 373 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 HSD3B2P26439 372 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 TBPL1P62380 186 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 B3GLCTQ6Y288 498 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 HUS1BQ8NHY5 278 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 MAL2Q969L2 176 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 ABCG4Q9H172 646 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 ZDHHC4Q9NPG8 344 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 SCP2D1Q9UJQ7 156 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 PADI2Q9Y2J8 665 aa15.23■□□□□ 0.03
NPHP3-201ENST00000337331 SLC19A2O60779 497 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 NCR1O76036 304 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SYN1P17600 705 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 UQCRC2P22695 453 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPHP3-201ENST00000337331 MBTPS1Q14703 1052 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SHFQ7M4L6 423 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 NLRC3Q7RTR2 1065 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SSX9Q7RTT3 188 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 WDSUB1Q8N9V3 476 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 OR52E4Q8NGH9 312 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 ZNF566Q969W8 418 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 LINC00052Q96N35 136 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 F2RL3Q96RI0 385 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 TRIB3Q96RU7 358 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 PIP5K1AQ99755 562 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SGIP1Q9BQI5 828 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 GLI3P10071 1580 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 CNMDO75829 334 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 MPC1LP0DKB6 136 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 HK1P19367 917 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 TNFRSF17Q02223 184 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 ENPP2Q13822 863 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
NPHP3-201ENST00000337331 OR5P2Q8WZ92 322 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 OR51I1Q9H343 314 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 ARNT2Q9HBZ2 717 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 IL26Q9NPH9 171 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 M0QZQ0 153 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 ITGA10O75578 1167 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 CD9P21926 228 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 EDNRAP25101 427 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 NKG7Q16617 165 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 OR8J1Q8NGP2 316 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 EXO5Q9H790 373 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SPHK2Q9NRA0 654 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 COPS7AQ9UBW8 275 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 E9PI62 339 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 SLC16A5O15375 505 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 FMO6PO60774 539 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 RENP00797 406 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 FABP1P07148 127 aa15.22■□□□□ 0.03
NPHP3-201ENST00000337331 HK3P52790 923 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms