RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 A8MVJ9 347 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 PTHP01270 115 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ACP2P11117 423 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ANXA8P13928 327 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 LIPAP38571 399 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ST13P50502 369 aaKnown RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 UBE2IP63279 158 aaKnown RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 CTAG1AP78358 180 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 HPCAP84074 193 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SLC13A2Q13183 592 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ZC3H12BQ5HYM0 836 aaKnown RBP11.77□□□□□ -0.53
LIMK1-201ENST00000336180 PGBD2Q6P3X8 592 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 B3GNT7Q8NFL0 401 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 GIMAP5Q96F15 307 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 NRBF2Q96F24 287 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 OR5M11Q96RB7 305 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 ACOT13Q9NPJ3 140 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 TAS2R7Q9NYW3 318 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 PSME2Q9UL46 239 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 POFUT2Q9Y2G5 429 aa11.77□□□□□ -0.53
LIMK1-201ENST00000336180 SMIM30A4D0T7 59 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 TNFRSF10CO14798 259 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 MAOAP21397 527 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 SSTR4P31391 388 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 CRISP1P54107 249 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 YPEL5P62699 121 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 NDUFAF6Q330K2 333 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 WDR45BQ5MNZ6 344 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 PRICKLE2Q7Z3G6 844 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 OOSP2Q86WS3 158 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 SRFBP1Q8NEF9 429 aaKnown RBP11.76□□□□□ -0.53
LIMK1-201ENST00000336180 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-201ENST00000336180 SLC38A3Q99624 504 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 CLEC2DQ9UHP7 191 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 A0A0J9YY10 115 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 OR5K3A6NET4 321 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 TLX2O43763 284 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-201ENST00000336180 KCNJ13O60928 360 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 GUCY1B2O75343 617 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 BCL10O95999 233 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 ALPPP05187 535 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 ALAS2P22557 587 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 GRK5P34947 590 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 RXRGP48443 463 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 MED22Q15528 200 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 OR52P1PQ8NH57 321 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 ZFPM2Q8WW38 1151 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 GAB3Q8WWW8 586 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 CNPPD1Q9BV87 410 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 MAN2C1Q9NTJ4 1040 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 TMEM9Q9P0T7 183 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 NDOR1Q9UHB4 597 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
LIMK1-201ENST00000336180 WWP2O00308 870 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 OR10H2O60403 315 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CCDC159P0C7I6 412 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CD36P16671 472 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 LIMS1P48059 325 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 RGS8P57771 180 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF770Q6IQ21 691 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 MFSD12Q6NUT3 480 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SAMD14Q8IZD0 417 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 PSD4Q8NDX1 1056 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 GRHL3Q8TE85 626 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 FKBP10Q96AY3 582 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 GABARAPL3Q9BY60 117 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 YTHDF1Q9BYJ9 559 aaKnown RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 WDR45Q9Y484 360 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TMEM184BQ9Y519 407 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CORINQ9Y5Q5 1042 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 HS3ST3A1Q9Y663 406 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TGFBR3LH3BV60 316 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 CHST10O43529 356 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 UBXN7O94888 489 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 PORP16435 677 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 GABRA3P34903 492 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 MAN2A2P49641 1150 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 UGT2B15P54855 530 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
LIMK1-201ENST00000336180 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 ATAD3BQ5T9A4 648 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 FCRLBQ6BAA4 426 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 KLHL35Q6PF15 583 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SHISA6Q6ZSJ9 500 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 SYT13Q7L8C5 426 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 GATSQ8NAP1 163 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 RHOXF1Q8NHV9 184 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 TMEM255BQ8WV15 326 aa11.75□□□□□ -0.53
LIMK1-201ENST00000336180 PITHD1Q9GZP4 211 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms