RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZNF439Q8NDP4 499 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 B3GNT7Q8NFL0 401 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 RBPMSQ93062 196 aaKnown RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 FBXL18Q96ME1 805 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 METTL17Q9H7H0 456 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 NPAP1Q9NZP6 1156 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 A6NL46 340 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF736B4DX44 427 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SMLR1H3BR10 107 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ADAM10O14672 748 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 MT-CO2P00403 227 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PIGRP01833 764 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PDGFAP04085 211 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 EMX1Q04741 257 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 RCAN2Q14206 197 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 MS4A13Q5J8X5 152 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 DBF4BQ8NFT6 615 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OR4K14Q8NGD5 310 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 FNDC9Q8TBE3 224 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 C16orf78Q8WTQ4 265 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ABHD5Q8WTS1 349 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TFAP2CQ92754 450 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 MAL2Q969L2 176 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ZBED3Q96IU2 234 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SLC30A3Q99726 388 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SLC19A3Q9BZV2 496 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 NAA50Q9GZZ1 169 aaKnown RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PXDNQ92626 1479 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 NPIPA7E9PJI5 369 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PHYHO14832 338 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 NPC1O15118 1278 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SCAMP2O15127 329 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 MAGEB4O15481 346 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CSTAP01040 98 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 NPIPA8P0DM63 369 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ETFAP13804 333 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CD9P21926 228 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PPT1P50897 306 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 KCNQ1P51787 676 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 YIF1BQ5BJH7 314 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 AGAP7PQ5VUJ5 663 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SLC24A5Q71RS6 500 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 BRIX1Q8TDN6 353 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CYB5D2Q8WUJ1 264 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 GLYATL1Q969I3 302 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 DNTTIP1Q9H147 329 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 EFCAB7A8K855 629 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SLC35E2BP0CK96 405 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 EIF2DP41214 584 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SGSHP51688 502 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 EIF4HQ15056 248 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PLAG1Q6DJT9 500 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 MEX3BQ6ZN04 569 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 GPR155Q7Z3F1 870 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 DNAJC22Q8N4W6 341 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 KCNJ9Q92806 393 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 HS6ST2Q96MM7 605 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 DZANK1Q9NVP4 752 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PIGBOS1A0A0B4J2F0 54 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 EMC8O43402 210 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ADORA3P0DMS8 318 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ETV5P41161 510 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 RPS5P46782 204 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 RRAS2P62070 204 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ZXDBP98169 803 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 TAP2Q03519 686 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PXDC1Q5TGL8 231 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 C18orf63Q68DL7 685 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 METTL2BQ6P1Q9 378 aaKnown RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 C6orf120Q7Z4R8 191 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 B3GNT8Q7Z7M8 397 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CLECL1Q8IZS7 167 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PITHD1Q9GZP4 211 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SIAEQ9HAT2 523 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ZDHHC4Q9NPG8 344 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM248Q9NWD8 314 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ZDHHC7Q9NXF8 308 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ANKRD34BA5PLL1 514 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 FBXO24O75426 580 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ATG12O94817 140 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 PPP1R3DO95685 299 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 T-ENOLP0DO92 83 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 JUPP14923 745 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 LAG3P18627 525 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CASRP41180 1078 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF84P51523 738 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 IL13RA1P78552 427 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 P2RY14Q15391 338 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 OR10K1Q8NGX5 313 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 FCRL1Q96LA6 429 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 SGCZQ96LD1 299 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 NT5DC2Q9H857 520 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms