RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCSMST1Q4G0I0 132 aa14.16□□□□□ -0.14
C9orf47-201ENST00000334490 DCST2Q5T1A1 773 aa14.16□□□□□ -0.14
C9orf47-201ENST00000334490 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
C9orf47-201ENST00000334490 FAM109BQ6ICB4 259 aaPredicted RBP14.16□□□□□ -0.14
C9orf47-201ENST00000334490 FBXO42Q6P3S6 717 aa14.16□□□□□ -0.14
C9orf47-201ENST00000334490 ZSCAN4Q8NAM6 433 aaPredicted RBP14.16□□□□□ -0.14
C9orf47-201ENST00000334490 CCNL2Q96S94 520 aaPredicted RBP14.16□□□□□ -0.14
C9orf47-201ENST00000334490 HTR3EA5X5Y0 456 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ADAP00813 363 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 GSTT2BP0CG30 244 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PYCR1P32322 319 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CAPZA1P52907 286 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 TLE3Q04726 772 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CCNJQ5T5M9 372 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ARL14Q8N4G2 192 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 METTL25Q8N6Q8 603 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 DOCK1Q14185 1865 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 FAM172BPA6NC97 362 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 TLCD2A6NGC4 264 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ABCB7O75027 752 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 HPRP00739 348 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CSN2P05814 226 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 RETP07949 1114 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CKMT1AP12532 417 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 GLULP15104 373 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 HTRA4P83105 476 aaPredicted RBP14.15□□□□□ -0.14
C9orf47-201ENST00000334490 FAM189A2Q15884 450 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 TMEM196Q5HYL7 178 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ZNF595Q8IYB9 648 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PROKR1Q8TCW9 393 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 DHRS1Q96LJ7 313 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PDFQ9HBH1 243 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CD93Q9NPY3 652 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 EURLQ9NYK6 297 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 SLC22A31A6NKX4 558 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ARNTLO00327 626 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 GKN3PP0CG01 181 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PGAM2P15259 253 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 TACR1P25103 407 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 SLC6A8P48029 635 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
C9orf47-201ENST00000334490 C14orf28Q4W4Y0 310 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PRAMEF8Q5VWM4 474 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 PRAMEF7Q5VXH5 474 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 METRNLQ641Q3 311 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CPZQ66K79 652 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CYP4V2Q6ZWL3 525 aaPredicted RBP14.15□□□□□ -0.14
C9orf47-201ENST00000334490 CLEC14AQ86T13 490 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 SPEM1Q8N4L4 309 aa14.15□□□□□ -0.14
C9orf47-201ENST00000334490 DNAJA4Q8WW22 397 aaPredicted RBP14.15□□□□□ -0.14
C9orf47-201ENST00000334490 BARD1Q99728 777 aaKnown RBP14.15□□□□□ -0.14
C9orf47-201ENST00000334490 ZNF878C9JN71 531 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 CPNE6O95741 557 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 UBL4AP11441 157 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 PCGF2P35227 344 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 RUNDC3AQ59EK9 446 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 C6orf141Q5SZD1 244 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 LILRA6Q6PI73 481 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 ZNF773Q6PK81 442 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.15□□□□□ -0.15
C9orf47-201ENST00000334490 THRSPQ92748 146 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 HDAC2Q92769 488 aaKnown RBP14.15□□□□□ -0.15
C9orf47-201ENST00000334490 OR5B2Q96R09 309 aa14.15□□□□□ -0.15
C9orf47-201ENST00000334490 SMIM30A4D0T7 59 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 ACPPP15309 386 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GRPRP30550 384 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 PSMD7P51665 324 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 OR1D5P58170 312 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GTF2IRD2BQ6EKJ0 949 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GTF2IRD2Q86UP8 949 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 OR2T4Q8NH00 348 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 TESCQ96BS2 214 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GPN2Q9H9Y4 310 aaPredicted RBP14.14□□□□□ -0.15
C9orf47-201ENST00000334490 ADAM29Q9UKF5 820 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 SLC6A14Q9UN76 642 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 RNF6Q9Y252 685 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 PCDHA9Q9Y5H5 950 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
C9orf47-201ENST00000334490 OR7A17O14581 309 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 AP1G1O43747 822 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 ACTC1P68032 377 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 ACTA1P68133 377 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 DCDP81605 110 aaKnown RBP14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GGTA1PQ4G0N0 100 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 FIP1L1Q6UN15 594 aaKnown RBP14.14□□□□□ -0.15
C9orf47-201ENST00000334490 UEVLDQ8IX04 471 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 FBXO27Q8NI29 283 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 TM9SF4Q92544 642 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 TMEM41AQ96HV5 264 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 PITX2Q99697 317 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 SEMA6CQ9H3T2 930 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 TBC1D29Q9UFV1 150 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 SLC7A7Q9UM01 511 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 KIAA1551Q9HCM1 1747 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 GGT2P36268 569 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 RAB38P57729 211 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 HBA1P69905 142 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 MS4A2Q01362 244 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 ZP2Q05996 745 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms