RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ACAD8Q9UKU7 415 aa5.79□□□□□ -1.48
USP16-201ENST00000334352 TRIM49D1C9J1S8 452 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PCDH7O60245 1069 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 F10P00742 488 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 CTAGE8P0CG41 777 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 HOXB4P17483 251 aaPredicted RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 CD53P19397 219 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 HOXC12P31275 282 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 SSTR4P31391 388 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 EIF1P41567 113 aaKnown RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 CLK1P49759 484 aaKnown RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 NAGLUP54802 743 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 FBXW4P57775 412 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PLCXD2Q0VAA5 305 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 XKR7Q5GH72 579 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 HP1BP3Q5SSJ5 553 aaPredicted RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 SYT10Q6XYQ8 523 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 CTAGE4Q8IX94 777 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 MREGQ8N565 214 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 CDRT4Q8N9R6 151 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 OR52R1Q8NGF1 315 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 KIF18AQ8NI77 898 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 SLC35B4Q969S0 331 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 TMEM237Q96Q45 408 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 TUBA1CQ9BQE3 449 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PIGQQ9BRB3 760 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 TRIM31Q9BZY9 425 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 NMUR2Q9GZQ4 415 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 SLC6A15Q9H2J7 730 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 TMEM45AQ9NWC5 275 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 CPSF2Q9P2I0 782 aaKnown RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 SCN3AQ9NY46 2000 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 NPIPA2E9PIF3 369 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 NPIPA3F8WFD2 350 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 UGT2B11O75310 529 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 MAPK1P28482 360 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 EVI2BP34910 448 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 CD79BP40259 229 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 KRTAP10-9P60411 292 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 KCNJ2P63252 427 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PSG6Q00889 435 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 ZNF585AQ6P3V2 769 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 ANGPTL8Q6UXH0 198 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 MEIOBQ8N635 442 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 NAXEQ8NCW5 288 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PIGTQ969N2 578 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PPWD1Q96BP3 646 aaKnown RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 ELP4Q96EB1 424 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 RMND5BQ96G75 393 aaPredicted RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 GMPPAQ96IJ6 420 aaPredicted RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 AMDHD1Q96NU7 426 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 SORBS1Q9BX66 1292 aaKnown RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 FBXO9Q9UK97 447 aaPredicted RBP5.78□□□□□ -1.48
USP16-201ENST00000334352 GPR52Q9Y2T5 361 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PLLPQ9Y342 182 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
USP16-201ENST00000334352 NKX2-6A6NCS4 301 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 CTIFO43310 598 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 EIF4E2O60573 245 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 PLIN3O60664 434 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 PRPS2P11908 318 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 GRK2P25098 689 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SERPINB4P48594 390 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 PRIM2P49643 509 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 IST1P53990 364 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SLC18A1P54219 525 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 NR1H2P55055 460 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 DUSP2Q05923 314 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 ETFDHQ16134 617 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 CPSF6Q16630 551 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP16-201ENST00000334352 DECR1Q16698 335 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 VPS26BQ4G0F5 336 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 LIPMQ5VYY2 423 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 DNM1P46Q6ZS02 220 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SPATA6LQ8N4H0 392 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 C1orf52Q8N6N3 182 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 C9orf106Q8NAJ2 232 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 STARD4Q96DR4 205 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SAP130Q9H0E3 1048 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 RRAGDQ9NQL2 400 aaPredicted RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 EXOSC3Q9NQT5 275 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 UTS2RQ9UKP6 389 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SETXQ7Z333 2677 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 USP9YO00507 2555 aaPredicted RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 FLNCQ14315 2725 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 A0A0G2JN53 185 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 CLCA1A8K7I4 914 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 SIX3O95343 332 aaPredicted RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 PGM3O95394 542 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 CD99P14209 185 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 NTSP30990 170 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 TERF1P54274 439 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 RPS3AP61247 264 aaKnown RBP5.77□□□□□ -1.49
USP16-201ENST00000334352 TNFAIP8L3Q5GJ75 292 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 PDSS1Q5T2R2 415 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 P2RY8Q86VZ1 359 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 IFNEQ86WN2 208 aa5.77□□□□□ -1.49
USP16-201ENST00000334352 RPRMLQ8N4K4 120 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms