RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SPATA5L1Q9BVQ7 753 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 BTBD1Q9H0C5 482 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 PIGUQ9H490 435 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 C11orf49Q9H6J7 331 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 LHX9Q9NQ69 397 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 IL36AQ9UHA7 158 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 ING4Q9UNL4 249 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 ASB4Q9Y574 426 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 TBX19O60806 448 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 LCTLQ6UWM7 567 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 FAM83HQ6ZRV2 1179 aaPredicted RBP22.17■■□□□ 1.14
TSKU-201ENST00000333090 OR8H3Q8N146 312 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 AMER3Q8N944 861 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 DEFB118Q96PH6 123 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.17■■□□□ 1.148e-7■■□□□ 14.4
TSKU-201ENST00000333090 GLIPR2Q9H4G4 154 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 TDP1Q9NUW8 608 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 PRKAB1Q9Y478 270 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 DNAH14Q0VDD8 3507 aa22.17■■□□□ 1.14
TSKU-201ENST00000333090 MTCL1Q9Y4B5 1905 aaKnown RBP22.17■■□□□ 1.14
TSKU-201ENST00000333090 CPSF4LA6NMK7 179 aaKnown RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 HRO43593 1189 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 POP7O75817 140 aaKnown RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 AP2S1P53680 142 aaPredicted RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 TSPAN31Q12999 210 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 LASP1Q14847 261 aaKnown RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 KRT74Q7RTS7 529 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 RFT1Q96AA3 541 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 ZDHHC5Q9C0B5 715 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 NT5DC2Q9H857 520 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 IMP3Q9NV31 184 aaKnown RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 KIF26AQ9ULI4 1882 aaPredicted RBP22.16■■□□□ 1.14
TSKU-201ENST00000333090 TEX28O15482 410 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 EFCAB14O75071 495 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 TFPIP10646 304 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 TYRP14679 529 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 HOXD10P28358 340 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 TALDO1P37837 337 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 IFNGR2P38484 337 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 PER3P56645 1201 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 BTG1P62324 171 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 PLA1AQ53H76 456 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 NUDT13Q86X67 352 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 ZNF547Q8IVP9 402 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 BBS10Q8TAM1 723 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 EPHX3Q9H6B9 360 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 NUDT15Q9NV35 164 aa22.16■■□□□ 1.14
TSKU-201ENST00000333090 GSAPA4D1B5 854 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 GLOD5A6NK44 160 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 HK1P19367 917 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 AADACL4Q5VUY2 407 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ZNF782Q6ZMW2 699 aaPredicted RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 LSRQ86X29 649 aaPredicted RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 GHDCQ8N2G8 530 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 OR4Q3Q8NH05 313 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 AIF1LQ9BQI0 150 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ZNF649Q9BS31 505 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ENAMQ9NRM1 1142 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ACSS1Q9NUB1 689 aaPredicted RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 CSNK1G3Q9Y6M4 447 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 PPM1DO15297 605 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 PRKRAO75569 313 aaKnown RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 SLC22A5O76082 557 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 SERPIND1P05546 499 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 FUT5Q11128 374 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 NOGQ13253 232 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 OMA1Q96E52 524 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ZCCHC2Q9C0B9 1178 aaKnown RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 SYNDIG1Q9H7V2 258 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 DDX31Q9H8H2 851 aaKnown RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 ISG20L2Q9H9L3 353 aaKnown RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 KCNN3Q9UGI6 736 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 H7BY64 318 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 SHOXO15266 292 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 EEF1E1O43324 174 aaKnown RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 FGBP02675 491 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 PSMB5P28074 263 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ACADLP28330 430 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 NNMTP40261 264 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 NCBP2P52298 156 aaKnown RBP eCLIP22.15■■□□□ 1.14
TSKU-201ENST00000333090 TEX261Q6UWH6 196 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 TMEM107Q6UX40 140 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 RASSF6Q6ZTQ3 369 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 RAD51AP1Q96B01 352 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 AMDHD1Q96NU7 426 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 PRAP1Q96NZ9 151 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 RHBGQ9H310 441 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ASB6Q9NWX5 421 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 GLTPQ9NZD2 209 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 ZNF624Q9P2J8 865 aaPredicted RBP22.15■■□□□ 1.14
TSKU-201ENST00000333090 LIPT1Q9Y234 373 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 U3KQ87 197 aa22.15■■□□□ 1.14
TSKU-201ENST00000333090 KPNA3O00505 521 aaPredicted RBP22.14■■□□□ 1.13
TSKU-201ENST00000333090 SLC2A10O95528 541 aa22.14■■□□□ 1.13
TSKU-201ENST00000333090 DHFRP00374 187 aa22.14■■□□□ 1.13
TSKU-201ENST00000333090 M6PRP20645 277 aa22.14■■□□□ 1.13
TSKU-201ENST00000333090 KHKP50053 298 aa22.14■■□□□ 1.13
TSKU-201ENST00000333090 PIP5KL1Q5T9C9 394 aa22.14■■□□□ 1.13
TSKU-201ENST00000333090 ZNF322Q6U7Q0 402 aaPredicted RBP22.14■■□□□ 1.13
TSKU-201ENST00000333090 PARS2Q7L3T8 475 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms