RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 IFNGR2P38484 337 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 ETV6P41212 452 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 OMPP47874 163 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 AVPR1BP47901 424 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 HOXC5Q00444 222 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 DEFB134Q4QY38 66 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 SLC27A4Q6P1M0 643 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 FIGLAQ6QHK4 219 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 KIAA1324Q6UXG2 1013 aaKnown RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 ZNF730Q6ZMV8 503 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 GDPGP1Q6ZNW5 385 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 RASSF6Q6ZTQ3 369 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CADM3Q8N126 398 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 OR4K14Q8NGD5 310 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 TRMT61AQ96FX7 289 aaKnown RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
TPM3-206ENST00000330188 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 CNIH4Q9P003 139 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 ANKMY1Q9P2S6 941 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 DAPP1Q9UN19 280 aa13.63□□□□□ -0.23
TPM3-206ENST00000330188 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 WWP2O00308 870 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 TNFRSF10CO14798 259 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 ETV5P41161 510 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 ETV1P50549 477 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
TPM3-206ENST00000330188 TFF2Q03403 129 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 SLC13A2Q13183 592 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 ADAM15Q13444 863 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 HTR4Q13639 388 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 TMEM31Q5JXX7 168 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 NKAIN4Q8IVV8 208 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 OR4N5Q8IXE1 308 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 OR2L13Q8N349 312 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 FAM46AQ96IP4 442 aaKnown RBP13.62□□□□□ -0.23
TPM3-206ENST00000330188 SP140LQ9H930 580 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 MRPS18AQ9NVS2 196 aaKnown RBP13.62□□□□□ -0.23
TPM3-206ENST00000330188 KLHL28Q9NXS3 571 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 ACTR10Q9NZ32 417 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 PILRAQ9UKJ1 303 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 STUB1Q9UNE7 303 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 ZNF443Q9Y2A4 671 aaPredicted RBP13.62□□□□□ -0.23
TPM3-206ENST00000330188 F5P12259 2224 aa13.62□□□□□ -0.23
TPM3-206ENST00000330188 A0A075B6Q4 140 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 GSAPA4D1B5 854 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 AP3D1O14617 1153 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PRODHO43272 600 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 B3GALT2O43825 422 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 MED26O95402 600 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 THY1P04216 161 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 NDUFV2P19404 249 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PSMA1P25786 263 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 GTF2E2P29084 291 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 RPS19P39019 145 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 SRP54P61011 504 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 MLLT1Q03111 559 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 CDC20Q12834 499 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 MAP4K2Q12851 820 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 GPR18Q14330 331 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 ALG11Q2TAA5 492 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PUS10Q3MIT2 529 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 SLC36A4Q6YBV0 504 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PLEKHM3Q6ZWE6 761 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 CCDC190Q86UF4 302 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 OR10G6Q8NH81 332 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 PIGXQ8TBF5 258 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 SLC9A6Q92581 669 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 RIPOR3Q96MK2 946 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 MCHR1Q99705 422 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 TRIM45Q9H8W5 580 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 LOC105369274A0A096LPK9 316 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 LOC102723532A0A0G2JNH3 316 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 HYKKA2RU49 373 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 OR6C74A6NCV1 312 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 AGR2O95994 175 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 ACP2P11117 423 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 IFNA8P32881 189 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 CD300CQ08708 224 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 DUSP5Q16690 384 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 ARHGAP11BQ3KRB8 267 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 FLYWCH1Q4VC44 716 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 C3orf38Q5JPI3 329 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 LIPKQ5VXJ0 399 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 TYW3Q6IPR3 259 aaKnown RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 USP53Q70EK8 1073 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 OR4N4Q8N0Y3 316 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 BARHL1Q9BZE3 327 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 KLHL25Q9H0H3 589 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
TPM3-206ENST00000330188 FGF20Q9NP95 211 aaPredicted RBP13.61□□□□□ -0.23
TPM3-206ENST00000330188 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms