RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GATAD2BQ8WXI9 593 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 SLC39A7Q92504 469 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 APOLD1Q96LR9 279 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 DNAJC11Q9NVH1 559 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 SPHK1Q9NYA1 384 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 TAS2R5Q9NYW4 299 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 MYEF2Q9P2K5 600 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 MGAT4CQ9UBM8 478 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 MKL2Q9ULH7 1088 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 EDARQ9UNE0 448 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 CHST2Q9Y4C5 530 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 PCDHGA9Q9Y5G4 932 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 TRAV20A0A0B4J274 112 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 H3BN98 237 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 TLX2O43763 284 aaPredicted RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 PCDH7O60245 1069 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 FZD7O75084 574 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 TRBC1P01850 177 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 IGHA1P01876 353 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 RB1P06400 928 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 PRSS56P0CW18 603 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 JUPP14923 745 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 PVALBP20472 110 aaPredicted RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 PSMB1P20618 241 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 ELAVL4P26378 380 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 SLC1A3P43003 542 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 GIPRP48546 466 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 CAV3P56539 151 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 KIAA1024LP59773 190 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 RING1Q06587 406 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 TTLL4Q14679 1199 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 RNF212Q495C1 297 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 ENTPD8Q5MY95 495 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 PGBD2Q6P3X8 592 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 JAZF1Q86VZ6 243 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 WDR20Q8TBZ3 569 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 CNOT9Q92600 299 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 EMID1Q96A84 441 aaPredicted RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 RNFT2Q96EX2 444 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 LRR1Q96L50 414 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 C12orf66Q96MD2 445 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 ABHD1Q96SE0 405 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 ACBD6Q9BR61 282 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 C1QTNF6Q9BXI9 259 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 MED17Q9NVC6 651 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 PPP1R14DQ9NXH3 145 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 VPS29Q9UBQ0 182 aa7.91□□□□□ -1.14
SKA2-201ENST00000330137 YARS2Q9Y2Z4 477 aaKnown RBP7.91□□□□□ -1.14
SKA2-201ENST00000330137 TRBC2A0A5B9 178 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 MYBPHLA2RUH7 354 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 LRRC72A6NJI9 287 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 MCIDASD6RGH6 385 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 PRR23D1E9PI22 279 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 HTR3BO95264 441 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SERPINA3P01011 423 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 EIF4EP06730 217 aaKnown RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 FCER2P06734 321 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 H1F0P07305 194 aaKnown RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 PRR23D2P0DMB1 279 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 EPORP19235 508 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 OR1E2P47887 323 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 CCR9P51686 369 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 MRPS10P82664 201 aaKnown RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 NFATC2Q13469 925 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 HTR4Q13639 388 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SMAD2Q15796 467 aaKnown RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.14
SKA2-201ENST00000330137 MS4A13Q5J8X5 152 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 AVPI1Q5T686 147 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 IDNKQ5T6J7 187 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 ZNF626Q68DY1 528 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 PTRHD1Q6GMV3 140 aaKnown RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 HAGHLQ6PII5 290 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 MOB3CQ70IA8 216 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SLC9B2Q86UD5 537 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 CLECL1Q8IZS7 167 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 THEM5Q8N1Q8 247 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 ZNF527Q8NB42 609 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 FBXO15Q8NCQ5 510 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 CDC26Q8NHZ8 85 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SMIM4Q8WVI0 70 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 POF1BQ8WVV4 589 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 NR4A3Q92570 626 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 MNTQ99583 582 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SEPT5Q99719 369 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 SLC6A20Q9NP91 592 aa7.9□□□□□ -1.14
SKA2-201ENST00000330137 SPATA6Q9NWH7 488 aaPredicted RBP7.9□□□□□ -1.14
SKA2-201ENST00000330137 IMPA2O14732 288 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 SYN3O14994 580 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 SLC16A5O15375 505 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 LRRTM2O43300 516 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.15
SKA2-201ENST00000330137 LRATO95237 230 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 GUCA1CO95843 209 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 LGALS2P05162 132 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 ZNF865P0CJ78 1059 aaPredicted RBP7.9□□□□□ -1.15
SKA2-201ENST00000330137 LAMP1P11279 417 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 MGMTP16455 207 aa7.9□□□□□ -1.15
SKA2-201ENST00000330137 ATP5A1P25705 553 aaKnown RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms