RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 NUMA1Q14980 2115 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 CPSF4LA6NMK7 179 aaKnown RBP14.41□□□□□ -0.1
BRCC3-201ENST00000330045 B4DXG7 233 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 C4orf51C9J302 202 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 SYT5O00445 386 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 FRS3O43559 492 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 NFATC1O95644 943 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 CD79BP40259 229 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 RAB28P51157 221 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 CAV3P56539 151 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 ST3GAL3Q11203 375 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 MADCAM1Q13477 382 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 ZIC1Q15915 447 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 PIP5KL1Q5T9C9 394 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 CD200R1LQ6Q8B3 271 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 VRK2Q86Y07 508 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 ACOT4Q8N9L9 421 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 ATP6V1C2Q8NEY4 427 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 NR4A3Q92570 626 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 MS4A6EQ96DS6 147 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 ASB16Q96NS5 453 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 OR7D2Q96RA2 312 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 PRDM7Q9NQW5 492 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 SEMA4GQ9NTN9 838 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 COMMD3Q9UBI1 195 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 GPR55Q9Y2T6 319 aaPredicted RBP14.41□□□□□ -0.1
BRCC3-201ENST00000330045 OR1A2Q9Y585 309 aa14.41□□□□□ -0.1
BRCC3-201ENST00000330045 A6NL46 340 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CASKO14936 926 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 PLA2G10O15496 165 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 GUCY1B2O75343 617 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CSF2P04141 144 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ALPPP05187 535 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ACP5P13686 325 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 MYL9P24844 172 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 SLC1A3P43003 542 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CDH11P55287 796 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 PPP3R1P63098 170 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 PRR5P85299 388 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CHRNEQ04844 493 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CDK10Q15131 360 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 C1QTNF12Q5T7M4 302 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 MRM1Q6IN84 353 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 GALNT12Q8IXK2 581 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 GJD3Q8N144 294 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 UBE2J2Q8N2K1 259 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ZNF485Q8NCK3 441 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 SLC7A6Q92536 515 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 DIO2Q92813 273 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ZG16BQ96DA0 208 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 FRMD6Q96NE9 622 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ARHGDIGQ99819 225 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 TRMT61BQ9BVS5 477 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 SLC38A1Q9H2H9 487 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 RNF121Q9H920 327 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 MRPS30Q9NP92 439 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 PRSS16Q9NQE7 514 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 IMP3Q9NV31 184 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CLCA2Q9UQC9 943 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 TRDV1A0A1B0GX56 115 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 A0A1W2PS29 197 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 LATO43561 262 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 PCDH8O95206 1070 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 NTN1O95631 604 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 AIFM1O95831 613 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 CSNK2A2P19784 350 aaPredicted RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ATP5A1P25705 553 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 IFNA8P32881 189 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 SOX18P35713 384 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 IL12RB1P42701 662 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 KIR2DL3P43628 341 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 OMPP47874 163 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 TGM3Q08188 693 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 C18orf63Q68DL7 685 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 ABHD17CQ6PCB6 329 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 KLK6Q92876 244 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 RFKQ969G6 155 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 EQTNQ9NQ60 294 aa14.4□□□□□ -0.1
BRCC3-201ENST00000330045 MBNL1Q9NR56 388 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 NUFIP1Q9UHK0 495 aaKnown RBP14.4□□□□□ -0.1
BRCC3-201ENST00000330045 TBC1D3BA6NDS4 549 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 EMC8O43402 210 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 CH25HO95992 272 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 CCNYL3P0C7X3 344 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 HOXB3P14651 431 aaPredicted RBP14.39□□□□□ -0.11
BRCC3-201ENST00000330045 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 TANGO2Q6ICL3 276 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 CACUL1Q86Y37 369 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 NUP43Q8NFH3 380 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 LILRB4Q8NHJ6 448 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 PIGXQ8TBF5 258 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 ENKURQ8TC29 256 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 TTYH2Q9BSA4 534 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 TEX101Q9BY14 249 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 NDRG2Q9UN36 371 aaKnown RBP14.39□□□□□ -0.11
BRCC3-201ENST00000330045 NOX1Q9Y5S8 564 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms