RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 RHCEP18577 417 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 NR4A1P22736 598 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 CHRNEQ04844 493 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 CENPSQ8N2Z9 138 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR4D11Q8NGI4 311 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR4C15Q8NGM1 316 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR4C6Q8NH72 309 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 QRSL1Q9H0R6 528 aaKnown RBP18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 GAREM1Q9H706 876 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ADAP2Q9NPF8 381 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ACER3Q9NUN7 267 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ERVK-18Q9QC07 812 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 LIPT1Q9Y234 373 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 ERGIC3Q9Y282 383 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 TPRKBQ9Y3C4 175 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 PCDHGA10Q9Y5H3 936 aa18.93■□□□□ 0.62
RIPPLY3-201ENST00000329553 LY6G6EA0A0G2JKS1 128 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 TMEM150CB9EJG8 249 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 TGFBR3LH3BV60 316 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 FMO3P31513 532 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 AVPR1BP47901 424 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 FAM214AQ32MH5 1076 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 ATAD3BQ5T9A4 648 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 PRAMEF8Q5VWM4 474 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 PRAMEF7Q5VXH5 474 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 PEAR1Q5VY43 1037 aaPredicted RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 HEPHL1Q6MZM0 1159 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 WDR74Q6RFH5 385 aaPredicted RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZNF605Q86T29 641 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 RBM45Q8IUH3 476 aaKnown RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 D2HGDHQ8N465 521 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZNF675Q8TD23 568 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 CDS1Q92903 461 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 CTHRC1Q96CG8 243 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZG16BQ96DA0 208 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 TRNT1Q96Q11 434 aaKnown RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 U3KQA8 63 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 VPS13AQ96RL7 3174 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR2W5A6NFC9 320 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 PATE3B3GLJ2 98 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 SIGLEC6O43699 453 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 SEMA7AO75326 666 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR2B3O76000 313 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 OCM2P0CE71 109 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 OCMP0CE72 109 aaPredicted RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 ACP2P11117 423 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 CYP4B1P13584 511 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 FOLR1P15328 257 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 OPRL1P41146 370 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC13A2Q13183 592 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 GANABQ14697 944 aaKnown RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 EXOSC7Q15024 291 aaKnown RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 NPTX1Q15818 432 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 GUSBP11Q6P575 273 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 FAHD1Q6P587 224 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 C16orf62Q7Z3J2 963 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 LACC1Q8IV20 430 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 DTWD2Q8NBA8 298 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 VANGL1Q8TAA9 524 aaPredicted RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 RORBQ92753 470 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 SH3YL1Q96HL8 342 aaPredicted RBP18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 BTBD2Q9BX70 525 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 RHCGQ9UBD6 479 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 GMPPBQ9Y5P6 360 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 SPEGQ15772 3267 aa18.92■□□□□ 0.62
RIPPLY3-201ENST00000329553 CPED1A4D0V7 1026 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 FFAR1O14842 300 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 FCMRO60667 390 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 CTNSO60931 367 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZIC2O95409 532 aaPredicted RBP18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 EPPINO95925 133 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 BTG2P78543 158 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 IL1RL1Q01638 556 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 DUSP5Q16690 384 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 PRAMEF17Q5VTA0 474 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 TCTN3Q6NUS6 607 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 LINC00299Q6ZSB3 139 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 IGFN1Q86VF2 1251 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 ATG16L2Q8NAA4 619 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR2I1PQ8NGU4 316 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR51Q1Q8NH59 317 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLC41A2Q96JW4 573 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 APOL4Q9BPW4 351 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 SPATA5L1Q9BVQ7 753 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 CUTCQ9NTM9 273 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 MAU2Q9Y6X3 613 aa18.91■□□□□ 0.62
RIPPLY3-201ENST00000329553 E9PQ18 207 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 H0YIG0 161 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 SLITRK5O94991 958 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 ATXN8OSP0DMR3 200 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 HMGA2P52926 109 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 PDX1P52945 283 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 NR0B2Q15466 257 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 EXOC3L2Q2M3D2 409 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 SYT6Q5T7P8 510 aaPredicted RBP18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 PRSS42Q7Z5A4 293 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 TSPYL5Q86VY4 417 aaPredicted RBP18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 ZNF595Q8IYB9 648 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 OR1L3Q8NH93 324 aa18.9■□□□□ 0.62
RIPPLY3-201ENST00000329553 YIPF6Q96EC8 236 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms