RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 GSKIPQ9P0R6 139 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 EXTL2Q9UBQ6 330 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 FAM155AB1AL88 458 aaPredicted RBP6.04□□□□□ -1.44
SSH1-202ENST00000326495 SEPT4O43236 478 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 NIPSNAP2O75323 286 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 STAG3L2P0CL84 134 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 ARHGAP1Q07960 439 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 RNASE10Q5GAN6 216 aaKnown RBP6.04□□□□□ -1.44
SSH1-202ENST00000326495 FUT10Q6P4F1 479 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 ZFAND4Q86XD8 727 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 NSMAFQ92636 917 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 GAL3ST4Q96RP7 486 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 SDK2Q58EX2 2172 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 USP54Q70EL1 1684 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 UNC119BA6NIH7 251 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 SNAP29O95721 258 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 MTNR1AP48039 350 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 RBMS3Q6XE24 437 aaKnown RBP6.04□□□□□ -1.44
SSH1-202ENST00000326495 LBX2Q6XYB7 198 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 CLEC20AQ6ZU45 233 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 SLC22A12Q96S37 553 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 ANKRD19PQ9H560 264 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 RXFP3Q9NSD7 469 aa6.04□□□□□ -1.44
SSH1-202ENST00000326495 TMEM200CA6NKL6 621 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 CXorf49A8MYA2 514 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 FOXO6A8MYZ6 492 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 PCDH17O14917 1159 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ADAM23O75077 832 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 DEDDO75618 318 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 SYNGR4O95473 234 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 AHSGP02765 367 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 JUPP14923 745 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 PCGF2P35227 344 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 BDKRB1P46663 353 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 NDUFAF5Q5TEU4 345 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 KIAA0895LQ68EN5 471 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 P4HA3Q7Z4N8 544 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 FAM109AQ8N4B1 249 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TCEANCQ8N8B7 351 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ISG20Q96AZ6 181 aaKnown RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 NLE1Q9NVX2 485 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 METTL15P1P0C7V9 234 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 CD9P21926 228 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ALAS2P22557 587 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TNFSF4P23510 183 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ETV1P50549 477 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ERVK-16P61578 105 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MPEG1Q2M385 716 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HIST2H3AQ71DI3 136 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TCTE3Q8IZS6 198 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 GTPBP8Q8N3Z3 284 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 SYT14Q8NB59 555 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 OR9A2Q8NGT5 310 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TRMT10AQ8TBZ6 339 aaKnown RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 TBC1D20Q96BZ9 403 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MGLLQ99685 303 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ACAD8Q9UKU7 415 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ADM5C9JUS6 153 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HAS3O00219 553 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 GAPDHSO14556 408 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 EPHX1P07099 455 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 PGCP20142 388 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MINDY4Q4G0A6 757 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 GDPD4Q6W3E5 623 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HERPUD2Q9BSE4 406 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 JAM3Q9BX67 310 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 AMBNQ9NP70 447 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 SLC22A14Q9Y267 594 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TP53TG5Q9Y2B4 290 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TRBV2A0A0J9YWF9 115 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
SSH1-202ENST00000326495 NTRK2Q16620 822 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 KCTD9Q7L273 389 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MAMDC2Q7Z304 686 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 FOXRED2Q8IWF2 684 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 CDK15Q96Q40 435 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TBX5Q99593 518 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 SLC38A8A6NNN8 435 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HLA-HP01893 362 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 PRKCGP05129 697 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 HOXD12P35452 270 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 SLC10A6Q3KNW5 377 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TMEM135Q86UB9 458 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MISPQ8IVT2 679 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 CACNG6Q9BXT2 260 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 FGFBP2Q9BYJ0 223 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 NENFQ9UMX5 172 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 SIPA1L3O60292 1781 aaPredicted RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 hCG_1809904A0A1W2PP81 198 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 A0A1W2PPE2 198 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 A0A1W2PR64 198 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 A0A1W2PRV1 198 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 WNT7AO00755 349 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ENSAO43768 121 aaKnown RBP6.03□□□□□ -1.44
SSH1-202ENST00000326495 PLATP00750 562 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 MBP02144 154 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 TFPTP0C1Z6 253 aa6.03□□□□□ -1.44
SSH1-202ENST00000326495 ARR3P36575 388 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms