RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ALOX5P09917 674 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 TRHRP34981 398 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 AVPR1BP47901 424 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 RGS8P57771 180 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 RPS3AP61247 264 aaKnown RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 RELAQ04206 551 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 PRKCDQ05655 676 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 ILF3Q12906 894 aaKnown RBP eCLIP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 EOGTQ5NDL2 527 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 ZNF730Q6ZMV8 503 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 PLEKHG7Q6ZR37 379 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 PRICKLE2Q7Z3G6 844 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 CLIP4Q8N3C7 705 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 ZFYVE21Q9BQ24 234 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 C8orf33Q9H7E9 229 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 TESQ9UGI8 421 aaKnown RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 DOLKQ9UPQ8 538 aa20.03■□□□□ 0.8
LIMS2-201ENST00000324938 ZNF443Q9Y2A4 671 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-201ENST00000324938 LOC105369274A0A096LPK9 316 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 LOC102723532A0A0G2JNH3 316 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 TCRBV21S2A2A0A5A6 115 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 AP3D1O14617 1153 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 DNAJB6O75190 326 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 UBXN7O94888 489 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 RAB36O95755 333 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 HBQ1P09105 142 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 CPMP14384 443 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 S100A5P33763 92 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 SOX6P35712 828 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 SOX3P41225 446 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 SNAPC1Q16533 368 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 ARHGAP11BQ3KRB8 267 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 SLC27A4Q6P1M0 643 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 Q6ZSR6 202 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 RASSF6Q6ZTQ3 369 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 OR4N4Q8N0Y3 316 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 OR52I1Q8NGK6 324 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 TMEM163Q8TC26 289 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 RSC1A1Q92681 617 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 LYRM4Q9HD34 91 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 CLDND1Q9NY35 253 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 HS3ST3A1Q9Y663 406 aa20.02■□□□□ 0.8
LIMS2-201ENST00000324938 SAGE2PA6NJ88 616 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 MYL12BO14950 172 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 UPK1BO75841 260 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 ALOX12P18054 663 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 GABRG2P18507 467 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 SOX18P35713 384 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 OMPP47874 163 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 MLLT11Q13015 90 aaPredicted RBP20.02■□□□□ 0.79
LIMS2-201ENST00000324938 PUS10Q3MIT2 529 aaKnown RBP20.02■□□□□ 0.79
LIMS2-201ENST00000324938 TYW3Q6IPR3 259 aaKnown RBP20.02■□□□□ 0.79
LIMS2-201ENST00000324938 GDPGP1Q6ZNW5 385 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 MEX3DQ86XN8 651 aaKnown RBP20.02■□□□□ 0.79
LIMS2-201ENST00000324938 OR4N5Q8IXE1 308 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 OR8D4Q8NGM9 314 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 PIGXQ8TBF5 258 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 SLC9A6Q92581 669 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 SAP130Q9H0E3 1048 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 KLHL25Q9H0H3 589 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 MTHFD2LQ9H903 347 aaPredicted RBP20.02■□□□□ 0.79
LIMS2-201ENST00000324938 TMEM74BQ9NUR3 256 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 SEC14L4Q9UDX3 406 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 WDR45Q9Y484 360 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 ENTPD2Q9Y5L3 495 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 PEX16Q9Y5Y5 336 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 SZT2Q5T011 3432 aa20.02■□□□□ 0.79
LIMS2-201ENST00000324938 KRBA1A5PL33 1030 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 C10orf142B7Z368 130 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 ZNF45Q02386 682 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 C1DQ13901 141 aaKnown RBP20.01■□□□□ 0.79
LIMS2-201ENST00000324938 DUSP5Q16690 384 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 DECR1Q16698 335 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 ZNF628Q5EBL2 1059 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 SLC36A4Q6YBV0 504 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 PLEKHM3Q6ZWE6 761 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 SIMC1Q8NDZ2 872 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 ACOT11Q8WXI4 607 aaPredicted RBP20.01■□□□□ 0.79
LIMS2-201ENST00000324938 FAM46AQ96IP4 442 aaKnown RBP20.01■□□□□ 0.79
LIMS2-201ENST00000324938 POT1Q9NUX5 634 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 EVA1BQ9NVM1 165 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 MRPS18AQ9NVS2 196 aaKnown RBP20.01■□□□□ 0.79
LIMS2-201ENST00000324938 NDUFB11Q9NX14 153 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 CNIH4Q9P003 139 aa20.01■□□□□ 0.79
LIMS2-201ENST00000324938 FAM221BA6H8Z2 402 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 C2orf74A8MZ97 194 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 H0YGG7 62 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 BOLA2-SMG1P6H3BVE0 249 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 OR5F1O95221 314 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 ACP2P11117 423 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 PORP16435 677 aaPredicted RBP20■□□□□ 0.79
LIMS2-201ENST00000324938 ARF3P61204 181 aaPredicted RBP20■□□□□ 0.79
LIMS2-201ENST00000324938 FHL5Q5TD97 284 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 PEX5LQ8IYB4 626 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 BAHD1Q8TBE0 780 aaPredicted RBP20■□□□□ 0.79
LIMS2-201ENST00000324938 GPBAR1Q8TDU6 330 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 PATE1Q8WXA2 126 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 FAM3CQ92520 227 aa20■□□□□ 0.79
LIMS2-201ENST00000324938 RERGQ96A58 199 aaPredicted RBP20■□□□□ 0.79
LIMS2-201ENST00000324938 MCHR1Q99705 422 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms