RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 FUNDC1Q8IVP5 155 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RCBTB1Q8NDN9 531 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 OR11G2Q8NGC1 345 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PTPMT1Q8WUK0 201 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ADIPOR1Q96A54 375 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TMCO6Q96DC7 493 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 GIMAP5Q96F15 307 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 CNRIP1Q96F85 164 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PEX11GQ96HA9 241 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF607Q96SK3 696 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 WWTR1Q9GZV5 400 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF350Q9GZX5 532 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 OR10A5Q9H207 317 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 PRORYQ9H606 182 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FOLH1BQ9HBA9 442 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 SH2D2AQ9NP31 389 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 RPS6KA6Q9UK32 745 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KLK13Q9UKR3 277 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FBXW2Q9UKT8 454 aa3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 FAF1Q9UNN5 650 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KLF13Q9Y2Y9 288 aaPredicted RBP3.05□□□□□ -1.92
SCAMP1-201ENST00000320280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TMEM238LA0A1B0GVL6 79 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 AQP12BA6NM10 295 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 C17orf105B2RV13 164 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 H3BNH8 94 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KIAA0513O60268 411 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 GMNNO75496 209 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PPM1BO75688 479 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DNAJC8O75937 253 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 CLPSP04118 112 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DBIP07108 87 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 RNASE1P07998 156 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 HOXD4P09016 255 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF28P17035 718 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 NCF2P19878 526 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TBXA2RP21731 343 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PAX7P23759 505 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ELAVL4P26378 380 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ELK4P28324 431 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KRT20P35900 424 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PIGAP37287 484 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 CCT3P49368 545 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 HLCSP50747 726 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC7A2P52569 658 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 CRISP3P54108 245 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 UFM1P61960 85 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 POU6F2P78424 691 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DUSP8Q13202 625 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 EBPQ15125 230 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KCNMB1Q16558 191 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KCTD19Q17RG1 926 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 MMEL1Q495T6 779 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SGO1Q5FBB7 561 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC25A53Q5H9E4 307 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DCAF10Q5QP82 559 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 GCNT6Q5T4J0 391 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 BORAQ6PGQ7 559 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC2A7Q6PXP3 512 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DLEU7Q6UYE1 221 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ASB18Q6ZVZ8 466 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 MAMDC2Q7Z304 686 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PLD3Q8IV08 490 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 AQP12AQ8IXF9 295 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TMEM178AQ8NBL3 297 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 C11orf65Q8NCR3 313 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 NUP43Q8NFH3 380 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 APOBEC4Q8WW27 367 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 HAS2Q92819 552 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 LRRC58Q96CX6 371 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SCMH1Q96GD3 660 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PPM1MQ96MI6 270 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PANX1Q96RD7 426 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 EBF4Q9BQW3 602 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 PINK1Q9BXM7 581 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 WDR55Q9H6Y2 383 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SYNPO2LQ9H987 977 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 APMAPQ9HDC9 416 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 NECTIN3Q9NQS3 549 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DDX18Q9NVP1 670 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 GPATCH2Q9NW75 528 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 HCN3Q9P1Z3 774 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 DHCR7Q9UBM7 475 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 RNF103-CHMP3A0A140T963 221 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TSPAN2O60636 221 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SERPINB7O75635 380 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ANP32DO95626 131 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 JUNP05412 331 aaKnown RBP3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 KITP10721 976 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 FCGR1AP12314 374 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 TSPAN8P19075 237 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 ITIH1P19827 911 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 NT5EP21589 574 aa3.04□□□□□ -1.92
SCAMP1-201ENST00000320280 SSR4P51571 173 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms