RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ZNF527Q8NB42 609 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SRFBP1Q8NEF9 429 aaKnown RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 OR51G2Q8NGK0 314 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ST8SIA4Q92187 359 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 GCDHQ92947 438 aaPredicted RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 PLD4Q96BZ4 506 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SCRN2Q96FV2 425 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF354BQ96LW1 612 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 TTTY10Q9BZA0 68 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.09□□□□□ -0.966e-7■□□□□ 10.8
PTPRA-202ENST00000318266 CWH43Q9H720 699 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 EMC7Q9NPA0 242 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 DMRT3Q9NQL9 472 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 TDP1Q9NUW8 608 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 KCMF1Q9P0J7 381 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 FLVCR2Q9UPI3 526 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SERTM1A2A2V5 107 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SIGLEC5O15389 551 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 KLHL18O94889 574 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 HPXP02790 462 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PEPDP12955 493 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 AKR1A1P14550 325 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 UQCRC2P22695 453 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PITPNBP48739 271 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SELENOPP49908 381 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 TSPAN5P62079 268 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 BTG1P62324 171 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 DGCR2P98153 550 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SIGLEC14Q08ET2 396 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 CAMK2DQ13557 499 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ARHGAP15Q53QZ3 475 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 CLLU1Q5K131 121 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 FUT10Q6P4F1 479 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 CBARPQ8N350 705 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ARL14EPQ8N8R7 260 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 TRPV1Q8NER1 839 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 OR2AP1Q8NGE2 309 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SMAP2Q8WU79 429 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF480Q8WV37 535 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ALG14Q96F25 216 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 DDOQ99489 341 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SMG9Q9H0W8 520 aaKnown RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 KCNN2Q9H2S1 579 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PPA2Q9H2U2 334 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 MCCC2Q9HCC0 563 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 MAB21L2Q9Y586 359 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SIRT4Q9Y6E7 314 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 HMGN4O00479 90 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SLC19A2O60779 497 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF821O75541 412 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PPM1BO75688 479 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SRPRAP08240 638 aaKnown RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 GNSP15586 552 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PCSK2P16519 638 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 POU3F2P20265 443 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 AHCYP23526 432 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 KCNJ5P48544 419 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SPINT3P49223 89 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SLC16A1P53985 500 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF155Q12901 538 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 MORN1Q5T089 497 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 VASNQ6EMK4 673 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 SFRP4Q6FHJ7 346 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 CD200R1LQ6Q8B3 271 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 PRSS45Q7RTY3 260 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 LINC01599Q8WXQ3 324 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 CXorf58Q96LI9 332 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 GSX2Q9BZM3 304 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 DDX31Q9H8H2 851 aaKnown RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 EXOSC1Q9Y3B2 195 aaKnown RBP9.08□□□□□ -0.96
PTPRA-202ENST00000318266 AUP1Q9Y679 476 aa9.08□□□□□ -0.96
PTPRA-202ENST00000318266 VWA8A3KMH1 1905 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SOCS6O14544 535 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SLC9A3R1O14745 358 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-202ENST00000318266 STATHP02808 62 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 ALDOBP05062 364 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 URODP06132 367 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 ASGR1P07306 291 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 CCL5P13501 91 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 TBXA2RP21731 343 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 ACSL1P33121 698 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SLC11A1P49279 550 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 TAP2Q03519 686 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SLC3A1Q07837 685 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 KCNA10Q16322 511 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 MINDY4Q4G0A6 757 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 TXNDC8Q6A555 127 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SLC24A5Q71RS6 500 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 KLHL36Q8N4N3 616 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 OR6M1Q8NGM8 313 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 OR5M3Q8NGP4 307 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 BBS10Q8TAM1 723 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 METTL2AQ96IZ6 378 aaKnown RBP9.07□□□□□ -0.96
PTPRA-202ENST00000318266 IL17FQ96PD4 163 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 SLC38A2Q96QD8 506 aa9.07□□□□□ -0.96
PTPRA-202ENST00000318266 DLL4Q9NR61 685 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms