RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 A4GNTQ9UNA3 340 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 A0A1W2PR48 441 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PRAMEF27A3QJZ7 478 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 GLOD5A6NK44 160 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 LMO7DNF2Z398 122 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CCRL2O00421 344 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CASC3O15234 703 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 CSTF2P33240 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
VRK3-201ENST00000316763 MPIP34949 423 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 SOX6P35712 828 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 MPLP40238 635 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 RHAGQ02094 409 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 RELAQ04206 551 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 HYAL2Q12891 473 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 NCF4Q15080 339 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ZNF425Q6IV72 752 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CD300LDQ6UXZ3 194 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 RABEPKQ7Z6M1 372 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 FAM20CQ8IXL6 584 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 OR4D11Q8NGI4 311 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 LMX1AQ8TE12 382 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 NR4A3Q92570 626 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CHCHD6Q9BRQ6 235 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 FUZQ9BT04 418 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PINK1Q9BXM7 581 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 SMOC1Q9H4F8 434 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ARMC7Q9H6L4 198 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 LYARQ9NX58 379 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PCDHGA5Q9Y5G8 931 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ISM1B1AKI9 464 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 B4DGG1 531 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 M0R3H8 397 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 AQP9O43315 295 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 EMC8O43402 210 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 SEMA7AO75326 666 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 SOX14O95416 240 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 LGI1O95970 557 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 STATHP02808 62 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 FASLGP48023 281 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 CD97P48960 835 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 HHEXQ03014 270 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 PIN1Q13526 163 aaPredicted RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 GPR19Q15760 415 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 SLC23A3Q6PIS1 610 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 C17orf82Q86X59 251 aaPredicted RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 LACC1Q8IV20 430 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 CCDC116Q8IYX3 515 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 AVL9Q8NBF6 648 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 SLC7A13Q8TCU3 470 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 TMEM80Q96HE8 168 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 PRRC1Q96M27 445 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 RSPO3Q9BXY4 272 aaPredicted RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 CAPN10Q9HC96 672 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 CALML5Q9NZT1 146 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 SLC13A4Q9UKG4 626 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 KLHL20Q9Y2M5 609 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 ATG4BQ9Y4P1 393 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 ENTPD2Q9Y5L3 495 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 MDC1Q14676 2089 aaKnown RBP13.28□□□□□ -0.28
VRK3-201ENST00000316763 LAMA1P25391 3075 aa13.28□□□□□ -0.28
VRK3-201ENST00000316763 MUC6Q6W4X9 2439 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 ISPDA4D126 451 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 AGAP5A6NIR3 686 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 PGRMC2O15173 223 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 PRKRAO75569 313 aaKnown RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 AIFM1O95831 613 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 HMGN2P05204 90 aaKnown RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 PORP16435 677 aaPredicted RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 GSTM3P21266 225 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 BUD31P41223 144 aaPredicted RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 NBL1P41271 181 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 ZNF45Q02386 682 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 OCLNQ16625 522 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 TSTQ16762 297 aaKnown RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 SLC48A1Q6P1K1 146 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 OGFOD3Q6PK18 319 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 PLEKHG7Q6ZR37 379 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 OR5M11Q96RB7 305 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 YIPF4Q9BSR8 244 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 TRIM45Q9H8W5 580 aaPredicted RBP13.27□□□□□ -0.28
VRK3-201ENST00000316763 UCK1Q9HA47 277 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 DNAJC27Q9NZQ0 273 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 MKLN1Q9UL63 735 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 DOLKQ9UPQ8 538 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 PEX16Q9Y5Y5 336 aa13.27□□□□□ -0.28
VRK3-201ENST00000316763 ZNF780BQ9Y6R6 833 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms