RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FUZQ9BT04 418 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FBXL3Q9UKT7 428 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 COL4A4P53420 1690 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TRAPPC13A5PLN9 417 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 AIPO00170 330 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FLRT2O43155 660 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TBL1XO60907 577 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 IL5P05113 134 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 NTSP30990 170 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 BLVRAP53004 296 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 LIM2P55344 173 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PIN1Q13526 163 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HS6ST3Q8IZP7 471 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR2T33Q8NG76 320 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HAVCR2Q8TDQ0 301 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC5A11Q8WWX8 675 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 KAT2AQ92830 837 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC35G5Q96KT7 338 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FAM83CQ9BQN1 747 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 YIPF4Q9BSR8 244 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 EPHX3Q9H6B9 360 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 DMRT3Q9NQL9 472 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ACSL6Q9UKU0 697 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 EXOGQ9Y2C4 368 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ACTL7AQ9Y615 435 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SCN1AP35498 2009 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 DAPL1A0PJW8 107 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PDCD5O14737 125 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF749O43361 778 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PPM1BO75688 479 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RP2O75695 350 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RASGRP1O95267 797 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 XPAP23025 273 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CD96P40200 585 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SPINT3P49223 89 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 DUSP4Q13115 394 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TUSC1Q2TAM9 212 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ADCK2Q7Z695 626 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC9B2Q86UD5 537 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TRAM1L1Q8N609 369 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 GPR32P1Q8NGA4 272 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR5AK3PQ8NH89 298 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC9A6Q92581 669 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FGF11Q92914 225 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 MED8Q96G25 268 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 AHCYL2Q96HN2 611 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PCDH10Q9P2E7 1040 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CIB4A0PJX0 185 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HMSDA8MTL9 139 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 A8MXK9 166 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TEX46H3BTG2 121 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CREBL2O60519 120 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 KHDRBS3O75525 346 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF821O75541 412 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 AQP8O94778 261 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 LDOC1O95751 146 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC16A8O95907 504 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ADRA2AP08913 450 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 IMPA1P29218 277 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 MAT2AP31153 395 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 B2MP61769 119 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FKBP1BP68106 108 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RAE1P78406 368 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 BTN1A1Q13410 526 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 GSG1Q2KHT4 349 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PGGHGQ32M88 737 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ACSM5Q6NUN0 579 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TMIGD1Q6UXZ0 262 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HORMAD2Q8N7B1 307 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR56A1Q8NGH5 318 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ELMOD3Q96FG2 381 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CTPS2Q9NRF8 586 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZCCHC3Q9NUD5 404 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 NLGN3Q9NZ94 848 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RASD1Q9Y272 281 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 BACE2Q9Y5Z0 518 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 MFSD2BA6NFX1 497 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR6C65A6NJZ3 312 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ANHXE9PGG2 379 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SC5DO75845 299 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ASGR2P07307 311 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 GIFP27352 417 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 LGALSLQ3ZCW2 172 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 MPPE1Q53F39 396 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 NHLRC3Q5JS37 347 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TMPRSS11BQ86T26 416 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SIAH3Q8IW03 269 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC43A2Q8N370 569 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 XAGE5Q8WWM1 108 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 YIPF5Q969M3 257 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RAD51AP1Q96B01 352 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TMED9Q9BVK6 235 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 B4GALT6Q9UBX8 382 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HRH3Q9Y5N1 445 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TRAV6A0A075B6T7 132 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 A0A0G2JMZ2 1700 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NPIPB15A6NHN6 443 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 LRRC37A2A6NM11 1700 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 COCHO43405 550 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms